Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01290 ATGAGTTCAAGCGATGATGAGAGTGCTTTAGGGCCGGACTCTCAATCTTCACCTGCCGCTCCATCGCCAGATTCTTCGTCTTCGTCTTCACCTGATCCACCCTCATCGTCGCCGCCATCACCGCCATCGCCATCTCCACCATCTCCCAATGCCAATTCCGATATCTCTCCTCCACCATCTACAGAAAACGATGATTCCTCACGACCATCACCCCCATCAGGTTCTATTATATCATCATCATCTTCATCTTCTTACTTCTCGAATAATTCTCCATCTCCAAAATCCCCATCCGATGGTTCTTCTGATGATCACAAATCCCCTCCAGCTCCAAAAGAGGGTGGTAGCAGCCCGCTGACGTCACCCGCTGCTCATTCTCCTCCATCCCGATCTTCGTCACCGGGGGACGAATTTTCTCCACCAGCTCTGCCGGAAGGAAAGGCATCACCAAGATCGCCAGCTAGACAACAAGCAACACCGTCCTCCGAAAAGGATTCATCCCCATCGGAAATCAACCCGGGGATTATAATTGGAGTGGCAGTGGGAGTGGGGGTTTTCATAATTGTTCTCATATCAGTAATTGCAGTTTGTTCAAAGAAGAAGAAGAGAAAGAGAGATCCTATGCCATATTATGGAGATCATGGTCATGGAGGACCTAAAGGTGGTGACTATTACAACAGTTCACAGCAACAACAAAACTGGCACAACGGCATGCACGGTCCCGGGACGGATCAATTTGGGAGGCCACCAGTATCGGGGTCTCCGGCCATGAATGGGTGGCCAATGAGCGGCGAGAACATGACTACAGGTAGCTCCTATGCAGGGCCTCCTCTTCCTCCACCATCACCATCGATTGCTTTTGGGTTCAACAAGAGCACGTTCACGTACGACGAACTCGCAGCAGCAACAGGTGGGTTTGCTCATGGAAACCTACTCGGGCAGGGTGGGTTCGGTTATGTGCACAAGGGGGTACTGCCCAATGGGAAGGAAGTGGCAGTGAAAAGCTTGAAGGTGGGCAGTGGGCAGGGTGAGAGGGAGTTCATGGCTGAAGTTGAGATTATCAGTAGAGTCCATCATCGGCATTTGGTGTCTTTGGTTGGGTTTTGCATTGCCGGTGGTCAAAGAATGTTGGTCTATGAGTTTGTTCCTAACAATACAATGGAGCATCATCTTCATGGCAAAGGTCTTCCAGTAATGGATTGGCCAACTAGACTTCGCATTGCCATAGGTTCTGCCAAGGGACTTGCTTATCTTCACGAAGATTGTCATCCAAAGATTATTCATCGAGATATCAAGTCAGCTAATATTCTGATCGATGCCAATTTTGAAGCTATGGTGGCTGATTTTGGATTGGCTAAGTTATCTACAGATAATCACACACACGTCTCAACTAGAGTCATGGGTACATTCGGGTATTTGGCACCAGAATACGCATCAAGCGGAAAGCTAACCGAAAAGTCTGATGTGTTCTCGTTTGGTGTAATGCTGTTGGAACTCATTACTGGAAAACGTCCCGTAGATCCTACTCATACCATGGAGGATAGCTTAGTTGATTGGGCTCGACCACTAATGACTCGAGCATTAATGGAAGGGATATACGATGAGTTGGTGGATATACGTTTGGAGAGAGAGTTCAACACACAAGAAATGGCTCGAATGGTGGCTTGTGCTGCAGCCTCCATACGACACTCGGCTAGAAAACGCCCAAAAATGAGCCAAGTGGTTCGAGCTTTAGAAGGAGACGTCTCACTGGACGACTTAAACGAAGGCATAAGACCAGGCCAAAGCTCCATCTTTAGCGCCACTAGCTCCGACTACGATTCCAGCACCTACCATGCCGACATGTCGAAATTCAGGAAGATCGCTCTGTCGGACGACAGCAGTGAACTCGCGACTTCAAGCAACGATTCTCGAGAAATGAACCATCCCGGCCCTGGGACCCAAAGGCCGCTCTTTTAA 1956 48.93 MSSSDDESALGPDSQSSPAAPSPDSSSSSSPDPPSSSPPSPPSPSPPSPNANSDISPPPSTENDDSSRPSPPSGSIISSSSSSSYFSNNSPSPKSPSDGSSDDHKSPPAPKEGGSSPLTSPAAHSPPSRSSSPGDEFSPPALPEGKASPRSPARQQATPSSEKDSSPSEINPGIIIGVAVGVGVFIIVLISVIAVCSKKKKRKRDPMPYYGDHGHGGPKGGDYYNSSQQQQNWHNGMHGPGTDQFGRPPVSGSPAMNGWPMSGENMTTGSSYAGPPLPPPSPSIAFGFNKSTFTYDELAAATGGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKVGSGQGEREFMAEVEIISRVHHRHLVSLVGFCIAGGQRMLVYEFVPNNTMEHHLHGKGLPVMDWPTRLRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILIDANFEAMVADFGLAKLSTDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTHTMEDSLVDWARPLMTRALMEGIYDELVDIRLEREFNTQEMARMVACAAASIRHSARKRPKMSQVVRALEGDVSLDDLNEGIRPGQSSIFSATSSDYDSSTYHADMSKFRKIALSDDSSELATSSNDSREMNHPGPGTQRPLF* 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17560875 17565525 + Chy7G141200.1 Chy07g01290 231301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01290 651 MobiDBLite consensus disorder prediction 118 135 - -
Chy07g01290 651 MobiDBLite consensus disorder prediction 201 276 - -
Chy07g01290 651 MobiDBLite consensus disorder prediction 1 170 - -
Chy07g01290 651 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Chy07g01290 651 MobiDBLite consensus disorder prediction 222 238 - -
Chy07g01290 651 Pfam Protein tyrosine and serine/threonine kinase 308 576 IPR001245 GO:0004672|GO:0006468
Chy07g01290 651 MobiDBLite consensus disorder prediction 32 54 - -
Chy07g01290 651 CDD STKc_IRAK 311 579 - -
Chy07g01290 651 Gene3D Phosphorylase Kinase; domain 1 281 380 - -
Chy07g01290 651 SMART serkin_6 305 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01290 651 MobiDBLite consensus disorder prediction 625 641 - -
Chy07g01290 651 MobiDBLite consensus disorder prediction 151 168 - -
Chy07g01290 651 MobiDBLite consensus disorder prediction 55 97 - -
Chy07g01290 651 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 24 629 - -
Chy07g01290 651 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 24 629 - -
Chy07g01290 651 MobiDBLite consensus disorder prediction 624 651 - -
Chy07g01290 651 MobiDBLite consensus disorder prediction 258 272 - -
Chy07g01290 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Chy07g01290 651 MobiDBLite consensus disorder prediction 1 31 - -
Chy07g01290 651 ProSiteProfiles Protein kinase domain profile. 305 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01290 651 Gene3D Transferase(Phosphotransferase) domain 1 381 588 - -
Chy07g01290 651 SUPERFAMILY Protein kinase-like (PK-like) 279 577 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01869 Chy-Chr2:21220644 Chy07g01290 Chy-Chr7:17560875 0 dispersed
Chy05g01369 Chy-Chr5:17799292 Chy07g01290 Chy-Chr7:17560875 0 dispersed
Chy07g01290 Chy-Chr7:17560875 Chy10g00904 Chy-Chr10:14739630 2.32E-162 dispersed
Chy07g01290 Chy-Chr7:17560875 Chy11g00389 Chy-Chr11:3684568 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71394 PF07714 PK_Tyr_Ser-Thr 8.40E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01290 - - csv:101214995 1033.09