Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01303 ATGAGCGGCCAGAAACGTAACTTCACGGCCACCACCGCCGTCGTCAGTCCCGTTGGCAGTCCTACCTCCGGCAACATCTCCGACAGCTCAACAAAAGAACAAGACAGGTTTCTTCCGATCGCAAACGTGAGCCGAATCATGAAGAAATCTCTTCCGGCTAACGCGAAAATCTCGAAAGAAGCTAAAGAAACAGTCCAAGAATGTGTGTCGGAGTTCATCAGCTTCATCACCGGGGAAGCCTCCGACAAGTGTCAAAGGGAAAAACGGAAGACGATCAACGGAGACGATTTGCTGTGGGCTATGACTACTTTAGGGTTCGAAAATTACGTTGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAAGAAAAACATTCTTTAGCTAGACAAGAGGATCCTTCTTTGTCTCCGCCAAAATCCGCCGCTGAACACATTATTGGAGGGAAATCGGCGAATTCGGTGATGGATTTTCAGAATTTCAATTCTGGGTTTTATTCATTGGGGAATCAAATTCAAAATCAGGGAAATCAGAAGAGTTTCAACATAATCGATGGCGTTGGATTTGGGGAAAATTTGAGGGGTTTCAATATAAATGGAGTTCATGAAAATGGAGAAGGGAATCGAGCTCGAGCCATGGCGGCTCATCTTCAACAGAGCTCCGGTACTTACTTGGTTTTTGCTTAA 693 45.02 MSGQKRNFTATTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQEDPSLSPPKSAAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQNQGNQKSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGTYLVFA* 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17697258 17698434 - Chy7G141330.1 Chy07g01303 231314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01303 230 Gene3D Histone, subunit A 24 148 IPR009072 GO:0046982
Chy07g01303 230 ProSitePatterns NF-YB/HAP3 subunit signature. 68 84 IPR003956 GO:0005634|GO:0006355|GO:0043565
Chy07g01303 230 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 20 186 - -
Chy07g01303 230 SUPERFAMILY Histone-fold 34 136 IPR009072 GO:0046982
Chy07g01303 230 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 20 186 IPR027113 GO:0001228|GO:0006355|GO:0016602
Chy07g01303 230 MobiDBLite consensus disorder prediction 1 33 - -
Chy07g01303 230 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 37 101 IPR003958 -
Chy07g01303 230 PRINTS CCAAT-binding transcription factor subunit A signature 103 121 - -
Chy07g01303 230 PRINTS CCAAT-binding transcription factor subunit A signature 84 102 - -
Chy07g01303 230 PRINTS CCAAT-binding transcription factor subunit A signature 65 83 - -
Chy07g01303 230 Coils Coil 113 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01888 Chy-Chr6:22731154 Chy07g01303 Chy-Chr7:17697258 1.28E-44 dispersed
Chy06g01902 Chy-Chr6:22863372 Chy07g01303 Chy-Chr7:17697258 2.85E-55 dispersed
Chy07g01303 Chy-Chr7:17697258 Chy10g00622 Chy-Chr10:12810053 1.53E-48 dispersed
Chy07g01303 Chy-Chr7:17697258 Chy04g02095 Chy-Chr4:26324861 6.00E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18348 PF00808 CBFD_NFYB_HMF 7.10E-27 CL0012 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01303 K08065 - csv:101214273 446.047