Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01304 ATGTGGGTGTGGCGGCTCGGCGTCGTGAAGTTTCGTGAAATCGCCTCACGTTTTGGAGGGAGGAGATATGATGAAACGGCTAAATGGGGCTTTGGTTTTGCTTTGGTTCATCTTTGTTGGGCAATTTTGTTGTACCAATGTCTCTGCAACTGTAGAAGTGACCTTGGAAATGCTGGATTGTCTGGTAAATTAGTACCACAGCTTGGTCAACTTAAAAGTCTTCAATACTTGGAGCTTTATGGTAACAACATAAGTGGAGAGATTCCAGATGATCTCGGGAACCTAGCAAATTTGGTGAGCCTAGACCTTTACTTGAACGGTTTAACTGGCCCGATTCCAGACACGTTTGGCAAGCTCACACAATTGCGTTTCCTTCGGCTAAATGACAACAAACTATCTGGCTTGATACCGATTTCCTTGATAAATATTTCCACCCTGCAAGTCTTGGATCTATCGAACAACCTTCTATCTGGAAAAGTTCCAAATAATGGCTCATTTTCACTATTTACTCCCATTAGTTTTGCAAATAACTTGGATCTATGTGGTCTGGTAACTGGGAAACCTTGCCCTGGGGATCCTCCCTTTTCTCCACCGCCGCCATTTGTTCCACAATCAACAGTTTCTTCCCATGAATTAAACAATCCCAATGGAGCAATTGTTGGAGGAGTTGCTGCAGGTGCTGCTTTACTTTTTGCTACACCGGCTATCATATTTGTCTATTGGCATCGGAGGAAATCACGAGAAATATTCTTCGATGTCCCTGCGGAAGAAGACTCAGAGATCAACTTGGGGCAGCTGAAACGGTTTTCTCTGAGAGACTTACAAGTTGCAACAGATAACTTCTGCAACAAAAATATTCTTGGTCGAGGTGGATTCGGTAAAGTCTATAGGGGACGTTTGGCTGATGGCTCGTTAGTAGCAGTAAAAAGGCTCAAAGAAGAGCGTACGCCAGGTGGGGAGTTACAGTTCCAAACAGAAGTAGAGATGATTAGCATGGCAGTGCACCGAAATCTTCTGCGACTACATGGATTTTGTACAACATCGAGTGAACGCCTCCTTGTTTATCCTTATATGGCCAACGGAAGTGTTGCATCATGTTTAAGAGAACGTCCACAGTCTGAAGCTCCTCTCGACTGGCCAACTCGAAAGAAAGTTGCATTAGGCTCTGCGAGGGGTCTTTCTTATTTACATGATGGATGTGATCCAAAAATCATCCATCGTGATGTGAAGGCTGCAAATATTCTACTAGATGAGGAATTCGAGGCTGTTGTGGGTGATTTTGGTCTTGCAAAGTTAATGGACTACAAGGATACTCATGTTACAACAGCAGTAAGAGGTACAATTGGGCATATAGCTCCAGAGTATCTCTCAACTGGGAAATCATCTGAAAAGACTGATGTCTTTGGTTATGGCATTATGCTTTTGGAGCTAATAACCGGACAAAGGGCTTTCGATCTTGCTCGACTGGCAAACGATGAAGATGTCATGCTGCTTGATTGGGTGAAAGGGCTTCTGAAAGAGAAAAAGTTGGAGATGTTGGTTGATCCTGATTTGAAGGAGAACTATGATGAGATTGAAGTTGAGCAAATAATCCAAGTAGCACTTCTCTGCACACAGAGCTCGCCTATGGAACGACCCAAAATGTCTGATGTGGTCAGAATGCTGGAAGGAGATGGGTTGGCTGAGCGATGGGAGGAATGGCAGCGAGTGGAGGTAGTTTACCATGAAACAGAATTGACATCTTCTCAAACTTCAGAATGGATGGTTGATTCGACTGAAAACGTTCGTGCTTTTGAATTATCTGGTCCTAGATAA 1815 43.69 MWVWRLGVVKFREIASRFGGRRYDETAKWGFGFALVHLCWAILLYQCLCNCRSDLGNAGLSGKLVPQLGQLKSLQYLELYGNNISGEIPDDLGNLANLVSLDLYLNGLTGPIPDTFGKLTQLRFLRLNDNKLSGLIPISLINISTLQVLDLSNNLLSGKVPNNGSFSLFTPISFANNLDLCGLVTGKPCPGDPPFSPPPPFVPQSTVSSHELNNPNGAIVGGVAAGAALLFATPAIIFVYWHRRKSREIFFDVPAEEDSEINLGQLKRFSLRDLQVATDNFCNKNILGRGGFGKVYRGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLHGFCTTSSERLLVYPYMANGSVASCLRERPQSEAPLDWPTRKKVALGSARGLSYLHDGCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDEDVMLLDWVKGLLKEKKLEMLVDPDLKENYDEIEVEQIIQVALLCTQSSPMERPKMSDVVRMLEGDGLAERWEEWQRVEVVYHETELTSSQTSEWMVDSTENVRAFELSGPR* 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17710286 17714369 + Chy7G141340.1 Chy07g01304 231315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01304 604 Gene3D Phosphorylase Kinase; domain 1 250 357 - -
Chy07g01304 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Chy07g01304 604 Gene3D Ribonuclease Inhibitor 41 191 IPR032675 -
Chy07g01304 604 SMART serkin_6 281 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01304 604 PANTHER - 51 604 - -
Chy07g01304 604 SUPERFAMILY Protein kinase-like (PK-like) 261 556 IPR011009 -
Chy07g01304 604 Gene3D Transferase(Phosphotransferase) domain 1 358 575 - -
Chy07g01304 604 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 51 604 - -
Chy07g01304 604 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Chy07g01304 604 SUPERFAMILY L domain-like 54 174 - -
Chy07g01304 604 ProSiteProfiles Protein kinase domain profile. 281 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01304 604 Pfam Protein tyrosine and serine/threonine kinase 284 555 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00853 Chy-Chr7:11131536 Chy07g01304 Chy-Chr7:17710286 0 dispersed
Chy07g01304 Chy-Chr7:17710286 Chy07g01343 Chy-Chr7:18069032 0 dispersed
Chy11g00012 Chy-Chr11:184979 Chy07g01304 Chy-Chr7:17710286 1.10E-169 dispersed
Chy07g01304 Chy-Chr7:17710286 Chy10g01091 Chy-Chr10:15982725 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71395 PF00069 Pkinase 1.30E-43 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01304 K13418 - csv:101208905 984.941