Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01307 ATGAACTCATCATCCACTAAATTTTACAATCCAGGAAGGATGGGACTCTATGAACCTATCCACCATATTGGAATGTGGGGTGAAACTTTTAGAGCCAATGCCAATTTAGATCCACCCTCCTCTTTTATCATCGAAGCCGATCCCAAATTAGAAAATCAGTCAGACGATGCTTCGCTTGGCTCACTTGGAGATGCTCATGTATATGACCAAGATGATACCAAACGCATTGATAAAATTCAAAGAAGGCTGGCACAAAATCGGGAAGCAGCTCGCAAAAGTCGCCTACGGAAAAAGGCTTATATTAAGCAATTGGAAACAAGCCGCATAAAGCTCATTCAATTGGAGCAAGAACTTGAAAAGGCAAGACAACAAGGTCTCTTGGCTGGATCCCGTTTTGATAATAACCAATTGGGTTTATCAGGAACCACAAATTCAGGCATCTTCGCATTTGAATCAGAGTATGAGCAATGGGTGGAAGAGCAGAACAGGCAGATTTGTGATCTGAGGACTGCTGTGCATGCTGATATTACTGATATCGAGCTTCGAATACTCGTGGAAAATGCAATGAGACATTACTTTAAATTTTTTCGCATGAAAGCTAAGGCTGCAAAAGCCGACGTCTCTTACATAATGTCAGGCATGTGGAAGACATCCGCGGAAAGACTTTTCTTATGGATAGGAGGATTTCGCCCTTCAGAACTTCTCAAGGTTTTGATACCTCAGCTGGAGACATTAACCGAACAACAAATTTCGGAAACGGGTAGCCTTAGAAAATCGTGTCTACAGGCAGAAGATGCTCTTAGACAAGGTATGGAAAAACTACAACAAAATCTATTTGAGAGCGTAGTGGCTGGTCAGCTAGGTGAAGGAAGTTATCCCCTACAGATGACTGCTGCAATGGAGAGATTAGAAGCGCTCGTTAGCTTTGTGAATCAGGCTGACCATCTACGACAGGAAACATTGCAACAGATGTACAAAATTCTAACGACTCGACAATCTGCTCAAGGCCTTCTTACACTGGGGGAGTTTTTCCAACGACTCCGAGCATTGAGCTCACTTTGGGGTAATCGTCCTTGTGAGCCTGCATAG 1089 43.16 MNSSSTKFYNPGRMGLYEPIHHIGMWGETFRANANLDPPSSFIIEADPKLENQSDDASLGSLGDAHVYDQDDTKRIDKIQRRLAQNREAARKSRLRKKAYIKQLETSRIKLIQLEQELEKARQQGLLAGSRFDNNQLGLSGTTNSGIFAFESEYEQWVEEQNRQICDLRTAVHADITDIELRILVENAMRHYFKFFRMKAKAAKADVSYIMSGMWKTSAERLFLWIGGFRPSELLKVLIPQLETLTEQQISETGSLRKSCLQAEDALRQGMEKLQQNLFESVVAGQLGEGSYPLQMTAAMERLEALVSFVNQADHLRQETLQQMYKILTTRQSAQGLLTLGEFFQRLRALSSLWGNRPCEPA* 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17728285 17732657 - Chy7G141370.1 Chy07g01307 231318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01307 362 PANTHER TRANSCRIPTION FACTOR TGA9 1 361 - -
Chy07g01307 362 Pfam bZIP transcription factor 77 111 IPR004827 GO:0003700|GO:0006355
Chy07g01307 362 Coils Coil 97 124 - -
Chy07g01307 362 Gene3D - 77 127 - -
Chy07g01307 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Chy07g01307 362 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Chy07g01307 362 PANTHER TRANSCRIPTION FACTOR TGA1 1 361 - -
Chy07g01307 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Chy07g01307 362 SMART brlzneu 74 136 IPR004827 GO:0003700|GO:0006355
Chy07g01307 362 Pfam Seed dormancy control 164 239 IPR025422 GO:0006351|GO:0043565
Chy07g01307 362 SUPERFAMILY Leucine zipper domain 79 120 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00061 Chy-Chr3:617777 Chy07g01307 Chy-Chr7:17728285 1.34E-129 dispersed
Chy07g01307 Chy-Chr7:17728285 Chy10g01378 Chy-Chr10:17993986 4.83E-103 dispersed
Chy12g00084 Chy-Chr12:849243 Chy07g01307 Chy-Chr7:17728285 7.65E-06 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18350 PF14144 DOG1 1.80E-28 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01307 K14431 - csv:116401613 706.057