Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01316 ATGTCGATCGCTAACGCCAACACGTCTCCGACTATCTCCGGCGTCTCAACGACGGTCGACAACACCAGCACCCTTGCAGACAGGGCTCAGTGGGTGGCAAACCCACCAGACCCACCAGGGATATGTCGAGACCTCATCGACTGGCTTCGCCAAACCATGTTTCCCGATCCCACCAAGCTTTTCCCACTCAAGAACAAGACTGGAACTGCGGTCCTGGGAAGGCTCTTGAAGGGTGTTTTCCCTATCCTCTGTTGGGGGCAGAGCTATAGTCTTGGAAAGTTTAAAAATGATGTCTTGGCTGGTTTGACACTTGCTAGCCTCTGCATTCCTCAGAGTATTGGTTACGCAAATCTGGCTAAGCTTGATCCTCAATATGGGCTTTATACGAGCATTGTGCCGCCGTTGGTTTATGCAATATTGGGAAGTTCGAGGGAAATAGCGATCGGACCGGTCGCTATAATATCTATGCTTTTGCCGACGATGATTCAGAAAATTCAAGATCCCGCCGCCGATCCTTTTGCGTATAGAAACCTTGTCTTCACCACCACTTTCTTCGCCGGAATCTTTCAAGCCGCCTTCGGACTTTTCCGGTTGGGATTTATGGTGGATTTTCTATCACAAGCTGCCATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGACTTCAACAACTCAAAGGATTGCTTGGAATCACTCACTTCACTAATAAAACTGATATCATCTCTGTTATGGAAGCTGTTTTCGCATCATTCCATCATCTTAATAATGATCAATGGAATCCCTTGAACTTCATCATTGGCTCTTCATTCCTTTCCTTCATCCTCATCACCAAATTATTGGGGAAGAAGTACAAGAAAGTATTCTGGTTACCAGCCATGGCTCCATTGGTGTCCGTAATCCTATCAACACTTTTGGTGTTCCTCACAAGAGCCGATGAACATGGCGTCAAGATCGTCAAACGAGTCCCCCCTGGCCTTAACCCCATCTCCACTCAAAACATCCAAATCCACACCCCTCACATTTCCCAAATCCTCAATGCTGCCCTCATCGTGGCCGTCGTAGCTCTCACTGAGGCGATTGCTGTGGGGAGATCATTGGCATCCATGAAAGGATACAACATTGATGGGAACAAAGAAATGGTTGCGTTAGGCTTCATGAACCTAGCTGGATCTCTTACTTCTTGCTATACAGCAACAGGTTCTCTGTCACGTTCAGCCGTGAATTTCAGTGCCGGTTGCGAGACGCCAGTTTCAAATGTGGTGATGGCGGTGACGGTGATGATATCATTGAAGATGTTTACCAAGCTCCTCTACTTCACTCCCAACGCCATCTTGGCTTCCATTATTCTGTCAGCTCTTCCTGGCCTCGTTGACATTCACCAAGCTTACAATATATGGAAGATCGACAAGCTTGACTTCTTGGCCTGTCTCGCAGCTTTTTTTGGAGTTCTCTTTCTATCTGTTGAATTCGGCCTCCTCCTTTCGTTGGTGATATCATTTGCAAAGATAATAGTAACCTCAATCAAACCTGGGACAGAGATATTGGGTAAAATCCCTGGAACCGATAACTTTTGTGATATTCATCAATATCCAATGGCTCTCAACACTCCTGGAGTCCTCATCGTTCGTGTTAAATCTGGCTTACTTTGCTTTGCAAATGCCAATTTCGTAAAGGACAGGATTTTGAGGTTCATCAGCAGCCAAGAAGCATCAGGAAAGGGAATTACTCAATTCCTAGTCATTGATCTCTCCAATTTAATGAACATTGACACTTCAGGAATTGCTTCTCTTGAAGAGCTGCATAAAAATTTGGCAAACAGTGGAATAGAGATGGCCATAGCAAATCCAAAATGGCAAGTGATTCACAAGCTAAAGGTATCAAATTTTGTTGCCAAACTCAAAGGGAGAGTTTTCTTAAGTGTTGGGGAAGCTGTGGACGCATGCCTTTCAGCTAAAATGGGAGCTGCCATCTAA 1977 45.52 MSIANANTSPTISGVSTTVDNTSTLADRAQWVANPPDPPGICRDLIDWLRQTMFPDPTKLFPLKNKTGTAVLGRLLKGVFPILCWGQSYSLGKFKNDVLAGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAILGSSREIAIGPVAIISMLLPTMIQKIQDPAADPFAYRNLVFTTTFFAGIFQAAFGLFRLGFMVDFLSQAAIVGFMGGAAIVIGLQQLKGLLGITHFTNKTDIISVMEAVFASFHHLNNDQWNPLNFIIGSSFLSFILITKLLGKKYKKVFWLPAMAPLVSVILSTLLVFLTRADEHGVKIVKRVPPGLNPISTQNIQIHTPHISQILNAALIVAVVALTEAIAVGRSLASMKGYNIDGNKEMVALGFMNLAGSLTSCYTATGSLSRSAVNFSAGCETPVSNVVMAVTVMISLKMFTKLLYFTPNAILASIILSALPGLVDIHQAYNIWKIDKLDFLACLAAFFGVLFLSVEFGLLLSLVISFAKIIVTSIKPGTEILGKIPGTDNFCDIHQYPMALNTPGVLIVRVKSGLLCFANANFVKDRILRFISSQEASGKGITQFLVIDLSNLMNIDTSGIASLEELHKNLANSGIEMAIANPKWQVIHKLKVSNFVAKLKGRVFLSVGEAVDACLSAKMGAAI* 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17804054 17809714 - Chy7G141460.1 Chy07g01316 231327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01316 658 ProSiteProfiles STAS domain profile. 547 649 IPR002645 -
Chy07g01316 658 PANTHER SULFATE TRANSPORTER 2.2 26 655 IPR030315 GO:0008272|GO:0015116
Chy07g01316 658 CDD STAS_SulP_like_sulfate_transporter 531 640 - -
Chy07g01316 658 Pfam STAS domain 531 645 IPR002645 -
Chy07g01316 658 TIGRFAM sulP: sulfate permease 81 640 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy07g01316 658 Pfam Sulfate permease family 94 479 IPR011547 GO:0016021
Chy07g01316 658 PANTHER SULFATE TRANSPORTER 26 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy07g01316 658 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Chy07g01316 658 SUPERFAMILY SpoIIaa-like 538 649 IPR036513 -
Chy07g01316 658 Gene3D STAS domain 510 652 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01316 Chy-Chr7:17804054 Chy09g00551 Chy-Chr9:5849473 0 dispersed
Chy07g01316 Chy-Chr7:17804054 Chy09g00548 Chy-Chr9:5755717 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01316 K17469 - csv:116403192 1249.57