Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01343 ATGAAAAGAAAAACGAAAAATCAGTCAACCGGCCGTAGGTCCACACTCCCTAACTGCGGGGGCCACATAACTGCCAGGTCACGAATCTTCAGGATTATTCTTCTGTCCCTCTTAAGAGCTGCGTTGAGTGTGATTTCGCTTGTGGCAGAGCTAAGTGGTGAACTGTTGAGAGATAAGAGTTGGTCGATTGGTTTGATGAGTAGTTGGGCGGTGGTAAATAATTTGATTTCGAAGTCCAAGGATGCGTTTGGTTTCATATTAGTCTTTGGGATTTGGTTTGGGAGTTTCGGAAGTGATGCACTCTATGCATTGAGGATTGCATTGAATGCAACAGCAAATCAGCTCACAGATTGGAACCCAAATCAAGTCAATCCATGTACCTGGTCCAATGTTATATGTAGGGGAAACAGTGTGATCTCTGTATCCTTGTCCACAATGGGATTTACTGGAACCTTGTCTCCGCGAATTGGAAGTATAAAATCACTTTCAACTCTCATTTTGCAGGGAAATTACATAACTGGGGAGATACCAAAGGATTTTGGAAACCTGACAAATTTGGTTAGTTTGGATTTGGGAAATAACAGCCTAACTGGCCAAATACCATCATCCCTGGGTAATCTCAAGAAACTACAGTTCTTAACTCTGAGTCAAAATCGTCTAACGGGGACTATTCCCGAGTCACTTTCAACCCTTCCTAGCTTGATTAATCTTCTGCTTGATTCGAATGATCTGAGTGGTCCAATTCCGCAGCAGTTATTTCAAGTTCCAAAATTCAACTTTTCTGCAAACAAGTTAAATTGTGGTGGGAAGTCTCTTCATGCCTGTGCTTCAGACAGTACAAACTCAGGTTCTTCAAATAAACCCAAGGTGGGCCTCATAGTTGGAATAATTGCTGGGTTCACCGTTGCTCTTCTTTTGGTCGGAGTATTATTTTTCTTGTCCAAGGGTAGATATAAAAGCTACAAGCGCGAAGTGTTTGTAGATGTTGCAGGTGAAGTTGATCGAAGAATTGCATTTGGTCAGTTGAAAAGATTTGCCTGGAGGGAACTACAGCTAGCTACAGAAAACTTTAGTGAAAAAAATGTTTTAGGACAAGGAGGCTTTGGAAAGGTGTACAAAGGGGTGCTTGCAGATGGCACCAAAGTTGCGGTGAAACGGTTGACTGATTATGAGAGTCCAGGGGGAGATGCAGCTTTTCAGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATCTGTTGCGTCTCATTGGATTCTGCACAACTCAGACAGAACGCCTATTGGTGTATCCCTTTATGCAGAACTTGAGTGTTGCCTACCGTCTTCGAGAACTAAAGCCCGGAGAAGCTGTTCTAGATTGGCCTACTCGAAAACGGGTGGCATTGGGCACAGCTCGTGGTTTAGAGTATCTTCATGAACATTGCAACCCAAAGATTATTCATCGAGATGTTAAGGCAGCTAATGTATTGCTTGATGAAGATTTTGAAGCAGTTGTTGGCGATTTTGGCTTAGCAAAGTTGGTTGATGTTAGGAAGACTAATGTCACTACTCAAATTCGAGGGACAATGGGTCACATAGCACCGGAGTACTTATCTACTGGAAAGTCATCCGAAAGGACTGATGTTTTTGGTTATGGTATCATGCTTTTAGAACTTGTTACAGGGCAACGTGCAATTGACTTCTCACGCTTAGAAGAAGAGGACGATGTTTTACTACTTGACCATGTTAAGAAACTAGAAAGGGAGAAACGACTCGATGCCATTGTCGATCGTAATCTAAATAACTACAACATTCAAGAGGTAGAGATGATGATTCAAGTGGCATTGCTGTGCACACAGCCATGCTCGGACGACCGTCCAGCAATGTCACAAGTCGTTCGGATGCTCGAAGGAGAGGGATTAGCAGAGAGGTGGGAAGAATGGCAGCATTTGGAGGTGACTCGCAGACAAGAATACGAAAGACTGCAGAGAAGATTCGAATGGGGAGAAGATTCAATACATAGACAGGATGCAATCCAATTATCTGGTGGAAGATGA 2040 42.99 MKRKTKNQSTGRRSTLPNCGGHITARSRIFRIILLSLLRAALSVISLVAELSGELLRDKSWSIGLMSSWAVVNNLISKSKDAFGFILVFGIWFGSFGSDALYALRIALNATANQLTDWNPNQVNPCTWSNVICRGNSVISVSLSTMGFTGTLSPRIGSIKSLSTLILQGNYITGEIPKDFGNLTNLVSLDLGNNSLTGQIPSSLGNLKKLQFLTLSQNRLTGTIPESLSTLPSLINLLLDSNDLSGPIPQQLFQVPKFNFSANKLNCGGKSLHACASDSTNSGSSNKPKVGLIVGIIAGFTVALLLVGVLFFLSKGRYKSYKREVFVDVAGEVDRRIAFGQLKRFAWRELQLATENFSEKNVLGQGGFGKVYKGVLADGTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLRELKPGEAVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQIRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNNYNIQEVEMMIQVALLCTQPCSDDRPAMSQVVRMLEGEGLAERWEEWQHLEVTRRQEYERLQRRFEWGEDSIHRQDAIQLSGGR* 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18069032 18076184 - Chy7G141730.1 Chy07g01343 231354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01343 679 Gene3D Transferase(Phosphotransferase) domain 1 434 650 - -
Chy07g01343 679 PANTHER LRR RECEPTOR-LIKE KINASE 98 679 - -
Chy07g01343 679 SUPERFAMILY Protein kinase-like (PK-like) 337 631 IPR011009 -
Chy07g01343 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Chy07g01343 679 ProSiteProfiles Protein kinase domain profile. 357 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01343 679 Pfam Leucine rich repeat N-terminal domain 99 133 IPR013210 -
Chy07g01343 679 SMART serkin_6 357 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy07g01343 679 Pfam Leucine rich repeat 161 220 IPR001611 GO:0005515
Chy07g01343 679 SUPERFAMILY L domain-like 107 265 - -
Chy07g01343 679 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Chy07g01343 679 Gene3D Ribonuclease Inhibitor 97 276 IPR032675 -
Chy07g01343 679 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 98 679 - -
Chy07g01343 679 Gene3D Phosphorylase Kinase; domain 1 326 433 - -
Chy07g01343 679 Pfam Protein kinase domain 358 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01304 Chy-Chr7:17710286 Chy07g01343 Chy-Chr7:18069032 0 dispersed
Chy07g01343 Chy-Chr7:18069032 Chy11g00012 Chy-Chr11:184979 0 dispersed
Chy07g01341 Chy-Chr7:18057291 Chy07g01343 Chy-Chr7:18069032 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71397 PF00069 Pkinase 3.70E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01343 - - csv:116403405 1114.75