Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g01379 | ATGACCCAGTTGATGAATCTAGCCATTGGAGTGATTTTAGTTGCAGTTTTAGTGGTTCTTCTTCTCATCTTCTTGAACAGAAGAGGAAAAGGGAAGGATAATGATGAATACAATGATATAGAGAGGAAACAAGAAAGGGAGAAAGGGGAAGAAGAAAGAGAAGAATTGGTGAGGTTTCAAGGTGGACAAGATCTTACTATTGTGGATATCTTGGAAGCTCCCGGTGAAGTGATTGGGAAAGCCAATCATGGAACTTTGTATAAGGCTTATTTGCAAGAAAGCAATGCAGTAAGGTTACTGAGGTTTCTGAGGCCAGTTTGTACTGCTGGGCTTGAAGATTTTGTCAGTGAAATTGAGTTTTTGGGTTCTATAAGACACCCAAATTTGGTGCCTCTTTTGGGATTCTATTCAGGTCCAAGAGCTGAAAAGCTTCTCATTCATCCATTTTATAGAAGAGGAAATCTAGCTCAGTTCATTAGAGATGGGAACGGTGACTCACACCGATGGGGAGTTATAAACAAGATCTCGTTTGGTATTGCGAAAGGGTTGGATCATCTTCATACTGGCTTGCAAAAGCCAACAATCCATGGGAATCTTCAATCAAAAAATGTTCTTTTGGACAGAAATTATGAACCGTATGTTTCGGATTTCGGTCTACATTTACTGTTGAATTCCTCATCTGCCCAAGAGGTAGTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAGGATGCAACTGAGGAGACTGATATCTATAGCTATGGGGTGATATTACTCGAGTTACTTTCGGGGAAGGAACCTTTCAACGAAAAACCAACTGTTCCTGATGAGGATTTTTACTTGCCTAACTTTATGAGAAATGCAGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTATATAGCAGCATTGATGGAAATCATGTTACTGAAGAAAAGATTCTCAAATTCTTTCAGCTCGCTATGGCTTGTTGCTCTCCTTCTCCTGCTCTTAGACCAAGTATGAAGCAAGTACTACGGAAGCTCAATGAAATCGGAAGGTAA | 1074 | 40.22 | MTQLMNLAIGVILVAVLVVLLLIFLNRRGKGKDNDEYNDIERKQEREKGEEEREELVRFQGGQDLTIVDILEAPGEVIGKANHGTLYKAYLQESNAVRLLRFLRPVCTAGLEDFVSEIEFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNGDSHRWGVINKISFGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRNYEPYVSDFGLHLLLNSSSAQEVVEASAANGYKAPELIKMKDATEETDIYSYGVILLELLSGKEPFNEKPTVPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNHVTEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGR* | 358 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 18431905 | 18433303 | + | Chy7G142090.1 | Chy07g01379 | 231390 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g01379 | 357 | Pfam | Protein tyrosine and serine/threonine kinase | 76 | 351 | IPR001245 | GO:0004672|GO:0006468 | |
Chy07g01379 | 357 | Gene3D | Phosphorylase Kinase; domain 1 | 41 | 149 | - | - | |
Chy07g01379 | 357 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 355 | - | - | |
Chy07g01379 | 357 | ProSiteProfiles | Protein kinase domain profile. | 72 | 357 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy07g01379 | 357 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 5 | 356 | - | - | |
Chy07g01379 | 357 | SUPERFAMILY | Protein kinase-like (PK-like) | 75 | 352 | IPR011009 | - | |
Chy07g01379 | 357 | Coils | Coil | 34 | 54 | - | - | |
Chy07g01379 | 357 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 5 | 356 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy07g01379 | Chy-Chr7:18431905 | Chy01g01352 | Chy-Chr1:17965266 | 6.48E-64 | dispersed | |
Chy07g01379 | Chy-Chr7:18431905 | Chy09g01029 | Chy-Chr9:12821454 | 5.16E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71398 | PF07714 | PK_Tyr_Ser-Thr | 6.00E-32 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g01379 | - | - | csv:101206706 | 650.973 |