Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chy07g01379	ATGACCCAGTTGATGAATCTAGCCATTGGAGTGATTTTAGTTGCAGTTTTAGTGGTTCTTCTTCTCATCTTCTTGAACAGAAGAGGAAAAGGGAAGGATAATGATGAATACAATGATATAGAGAGGAAACAAGAAAGGGAGAAAGGGGAAGAAGAAAGAGAAGAATTGGTGAGGTTTCAAGGTGGACAAGATCTTACTATTGTGGATATCTTGGAAGCTCCCGGTGAAGTGATTGGGAAAGCCAATCATGGAACTTTGTATAAGGCTTATTTGCAAGAAAGCAATGCAGTAAGGTTACTGAGGTTTCTGAGGCCAGTTTGTACTGCTGGGCTTGAAGATTTTGTCAGTGAAATTGAGTTTTTGGGTTCTATAAGACACCCAAATTTGGTGCCTCTTTTGGGATTCTATTCAGGTCCAAGAGCTGAAAAGCTTCTCATTCATCCATTTTATAGAAGAGGAAATCTAGCTCAGTTCATTAGAGATGGGAACGGTGACTCACACCGATGGGGAGTTATAAACAAGATCTCGTTTGGTATTGCGAAAGGGTTGGATCATCTTCATACTGGCTTGCAAAAGCCAACAATCCATGGGAATCTTCAATCAAAAAATGTTCTTTTGGACAGAAATTATGAACCGTATGTTTCGGATTTCGGTCTACATTTACTGTTGAATTCCTCATCTGCCCAAGAGGTAGTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAGGATGCAACTGAGGAGACTGATATCTATAGCTATGGGGTGATATTACTCGAGTTACTTTCGGGGAAGGAACCTTTCAACGAAAAACCAACTGTTCCTGATGAGGATTTTTACTTGCCTAACTTTATGAGAAATGCAGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTATATAGCAGCATTGATGGAAATCATGTTACTGAAGAAAAGATTCTCAAATTCTTTCAGCTCGCTATGGCTTGTTGCTCTCCTTCTCCTGCTCTTAGACCAAGTATGAAGCAAGTACTACGGAAGCTCAATGAAATCGGAAGGTAA	1074	40.22	MTQLMNLAIGVILVAVLVVLLLIFLNRRGKGKDNDEYNDIERKQEREKGEEEREELVRFQGGQDLTIVDILEAPGEVIGKANHGTLYKAYLQESNAVRLLRFLRPVCTAGLEDFVSEIEFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNGDSHRWGVINKISFGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRNYEPYVSDFGLHLLLNSSSAQEVVEASAANGYKAPELIKMKDATEETDIYSYGVILLELLSGKEPFNEKPTVPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNHVTEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGR*	358

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
7	18431905	18433303	+	Chy7G142090.1	Chy07g01379	231390

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chy07g01379	357	Pfam	Protein tyrosine and serine/threonine kinase	76	351	IPR001245	GO:0004672\|GO:0006468
	Chy07g01379	357	Gene3D	Phosphorylase Kinase; domain 1	41	149	-	-
	Chy07g01379	357	Gene3D	Transferase(Phosphotransferase) domain 1	151	355	-	-
	Chy07g01379	357	ProSiteProfiles	Protein kinase domain profile.	72	357	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Chy07g01379	357	PANTHER	PROTEIN KINASE SUPERFAMILY PROTEIN	5	356	-	-
	Chy07g01379	357	SUPERFAMILY	Protein kinase-like (PK-like)	75	352	IPR011009	-
	Chy07g01379	357	Coils	Coil	34	54	-	-
	Chy07g01379	357	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED	5	356	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Chy07g01379	Chy-Chr7:18431905	Chy01g01352	Chy-Chr1:17965266	6.48E-64	dispersed
	Chy07g01379	Chy-Chr7:18431905	Chy09g01029	Chy-Chr9:12821454	5.16E-99	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	71398	PF07714	PK_Tyr_Ser-Thr	6.00E-32	CL0016	Chy	PK

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chy07g01379	-		-	csv:101206706	650.973