Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01391 ATGGCTAATTCCCGACCTCTTCCTCATCGCAGTGGAGCAGGTATAGTCAAAAGTATCCGTTTAGAGAACTTCATGTGTCACAGCAATTTGTATATTCAATTTGGCGAGTGGCTCAATTTCATTACTGGGCAGAATGGAAGTGGTAAGAGTGCTATTTTGACTGCTTTGTGTGTTGCATTTGGCTGTCGAGCTAAAGGGACCCAAAGGGCAGCTACGTTGAAGGATTTTATTAAAACTGGTTGCAGTCATGCTGTCATCCATGTTGTATTGCAAAATAATGGGGAGGATGCTTTCAAGCATGGAATATATGGAGACGTTATAATCATCGAAAGAAGGATTTCTGAATCCACTAGTGCCATTGTTTTGAAGGATTGTCAAGGAAAAAAGGTTGCCAGCCGAAGGGATGAACTACGAGAGCTAGTAGAGCATTTTAACATAGATGTTGAGAATCCATGTGTAATAATGAGTCAAGACAAAAGTAGAGAGTTCCTGCATTCTGGAAACGACAAAGACAAATTTAAGTTCTTTTTCAAGGCAACTCTTCTTCAGCAAGTGGACGATCTGCTGAAAAATATTTTTGATCATTTGAGATCTGCTAATGCACTTGTTGATGACTTGGAGTCTACCATACGACCTGTAGAGAAGGAACTGAATGAGCTGCGAGGAAAAATTAAAAACATGGAGCAAGTAGAAGAAATCTCTCAACAAGTTCAACAATTAAAGAAAAAGCTTGCTTGGTCATGGGTATATGATGTAGACAAGCAGCTTCAGGAGCAAAGTGCAAAAATAGGAAAGCTCCAAGATCGCATTCCTATTTGTCGAGCAAAAATTGATCATCAGCTGGGTCTGGTGGAAAAATTAAGAGAACGCTATATCGAGAAAAAAACCCAAATTGCTAGCATGATGGAGAGAACTTCAGAAGTGAGAAGAATGAAGGATGAACTGCAGGAAACTCTTACCTTGGCAACAAGAGAGAAGCTCGGACTTGAAGAGGAGCATGGTCGTAAAATAAACTACATCCAAAAGCTGGCAAAGCGTGTTAGGCTGCTTGAGCAACAAGTTCAAGATATTCATGAGCAGCACATAAAAAATACCCAGGCTGAAGAATCTGAAATTGAGGAAAAGTTGAAGGAACTCGATTCGGAGACTGAAGCTGCTAAGTCAACAGTAATGAGGTTGAAAGAGGAGGAGAATGCCTTGATGGAAAGTCTGTACAGTGGGAGAAATGATATAAAAAAGATTGCCGAAGAGATTGCAAGTTACGAGAAAAAAGCCTATGAATTTTCTCACTCAATTCAAGAGCTCAAGCAGCATCAAACCAACAAGGTCACAGCTTTTGGAGGTGACAAAGTCATTCAATTATTACGTGCAATTGAGAGACACCATCGAAGGTTCAAGAAACCTCCCATTGGTCCAATTGGTTCCCATCTGAATTTGGTCAATGGTGACATGTGGGCTCCTGCTGTTGAAATTGCCATTGGGAGGTTGCTCAATGCTTTCATCGTGACTGATCACCAAGATTCTCTTCTTTTGAGAAGATGTGCAAATGAAGCTAATTATAGGCAACTCCCAATTGTCATCTATGACTTTTCAAGACCAGTGTTAAATATTCCAGCTCACATGCTTCCTCAAACAAAGCATCCTACAACCCTTTCTGTCATTCATTCTGAAAACCATACTGTCATCAATGTTTTGATAGATAAGGGTGATGCTGAGAGGCAAGTGCTTGTTAAAGATTATAATGTGGGTAAATCAGTTGCATTTGACCAACGGATCTCAAATCTCAAGGAGGTCTTTACATTAGATGGATACAAAATGTTTTCACGTGGTTCTGTTCAGACAATTCTTCCCCCAGTTAGAAAGCCCAGAAGTGGCAGACTTTGTAGCTCCTTTGACGACCAAATTAAAAGTCTTGAAAAAGATGCATTGAATGTAAAACAAGAAGCTGAACAATGTAGGAAGAGGAAGAGAGTTTCAGAAGAACAACTCCGGGATCTTGAAGACAACCTAAACAATGCGAAGAGGAGGTGTCGGAGTGCAGAACGGTTTTTAATGTCCAAAAATTTGGAGCTGCAAGATTTACGAAAGTCACAAGTTGCTGAAACTAGTTCAGTACCTTCATCAAATGTGGATGAGCTACACCAAGAAATTTCTAAAATTGAAGAGGAGATACAAGAGAATAAGATGCTTCTTGAAAAATTTAGAGTTAGGATGAACGAAGCGGAAGCAAAGGCAAAAGATCTTAAAGTATCATTTGAAAATCTGTGTGAGTCGGCAAAAGGAGAAATTGATGCATTTGAAGAAGCTGAGAGAGATATGTTGCAGCTTGAAAGAAAATTGCATTCTGCAGAAAAGGAGAAGGATCATTATGAAGGTATTATGACTAATAAGGTCCTTTTTGATATTAAAGAGGCAGAGAGACAACATCAGGAGCTTGAGCGTCATCGTAAGGAGAGTTACAGTAAGGCTTCAATAATATGTCCTGAGAGTGAAATTGAGGCTTTAGGTGATTGGGATGGGAGCACACCTGAACAACTCAGTGCACAATTAACGAGGCTAAATCAGAGACTTAATAATGAGACCAGAAGATGTTCTGAATCTTTGGAAGACCTGAGGATGATGTATGAGAAAAAGGAGCGCACAATTATAAGAAAACGACAGACTTATAAAAGTTTTAGAGAGAAGTTGGAT 2691 39.65 MANSRPLPHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILTALCVAFGCRAKGTQRAATLKDFIKTGCSHAVIHVVLQNNGEDAFKHGIYGDVIIIERRISESTSAIVLKDCQGKKVASRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVDDLLKNIFDHLRSANALVDDLESTIRPVEKELNELRGKIKNMEQVEEISQQVQQLKKKLAWSWVYDVDKQLQEQSAKIGKLQDRIPICRAKIDHQLGLVEKLRERYIEKKTQIASMMERTSEVRRMKDELQETLTLATREKLGLEEEHGRKINYIQKLAKRVRLLEQQVQDIHEQHIKNTQAEESEIEEKLKELDSETEAAKSTVMRLKEEENALMESLYSGRNDIKKIAEEIASYEKKAYEFSHSIQELKQHQTNKVTAFGGDKVIQLLRAIERHHRRFKKPPIGPIGSHLNLVNGDMWAPAVEIAIGRLLNAFIVTDHQDSLLLRRCANEANYRQLPIVIYDFSRPVLNIPAHMLPQTKHPTTLSVIHSENHTVINVLIDKGDAERQVLVKDYNVGKSVAFDQRISNLKEVFTLDGYKMFSRGSVQTILPPVRKPRSGRLCSSFDDQIKSLEKDALNVKQEAEQCRKRKRVSEEQLRDLEDNLNNAKRRCRSAERFLMSKNLELQDLRKSQVAETSSVPSSNVDELHQEISKIEEEIQENKMLLEKFRVRMNEAEAKAKDLKVSFENLCESAKGEIDAFEEAERDMLQLERKLHSAEKEKDHYEGIMTNKVLFDIKEAERQHQELERHRKESYSKASIICPESEIEALGDWDGSTPEQLSAQLTRLNQRLNNETRRCSESLEDLRMMYEKKERTIIRKRQTYKSFREKLD 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18523184 18539219 + Chy7G142210.1 Chy07g01391 231402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01391 897 Coils Coil 850 870 - -
Chy07g01391 897 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 9 896 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Chy07g01391 897 Coils Coil 710 793 - -
Chy07g01391 897 Pfam AAA domain 18 244 IPR038729 GO:0140664
Chy07g01391 897 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 9 896 - -
Chy07g01391 897 Gene3D - 628 800 - -
Chy07g01391 897 Coils Coil 203 243 - -
Chy07g01391 897 SUPERFAMILY Smc hinge domain 423 611 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Chy07g01391 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 294 IPR027417 -
Chy07g01391 897 Coils Coil 635 683 - -
Chy07g01391 897 Coils Coil 802 822 - -
Chy07g01391 897 Gene3D - 16 266 IPR027417 -
Chy07g01391 897 Coils Coil 362 396 - -
Chy07g01391 897 Coils Coil 340 360 - -
Chy07g01391 897 CDD ABC_SMC6_euk 16 168 - -
Chy07g01391 897 Coils Coil 284 304 - -
Chy07g01391 897 Coils Coil 312 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01830 Chy-Chr1:23776959 Chy07g01391 Chy-Chr7:18523184 5.32E-16 dispersed
Chy06g00848 Chy-Chr6:6099475 Chy07g01391 Chy-Chr7:18523184 7.79E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01391 K22804 - csv:101208493 1699.49