Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01392 GCTTGCAAGAAAGCTCTTCAGCTACGGTGGAACAAGTTTGAAAGGAATGCTAGTCTTTTGAAGCGCCAATTGACTTGGCAATTTAATGGCCATTTAAGAAAAAAAGGGATCAGCGGACATATAAAAGTTAATTATGAGGAAAAGACCCTCTCAGTTGAGGTGAAGATGCCCCAGGATGCATCCAGCAGTTCTGTTCGTGATACTCGTGGACTTTCAGGTGGAGAACGATCATTTTCAACTCTATGCTTTGCTTTGGCATTGCACGAGATGACAGAAGCCCCATTTCGAGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTAAGTCGGAAAATTAGCTTAGACACTCTTGTGGATTTTGCATTGGCACAAGGCTCCCAATGGATATTTATCACGCCTCATGACATCGGGGTGGTAAAACAAGGAGAAAGAATCAAGAAGCAACAAATGGCAGCTCCTCGATCGTGA 468 43.38 ACKKALQLRWNKFERNASLLKRQLTWQFNGHLRKKGISGHIKVNYEEKTLSVEVKMPQDASSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFITPHDIGVVKQGERIKKQQMAAPRS* 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18541073 18542391 + Chy7G142220.1 Chy07g01392 231403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01392 155 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 1 155 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Chy07g01392 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 146 IPR027417 -
Chy07g01392 155 Gene3D - 2 151 IPR027417 -
Chy07g01392 155 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 1 155 - -
Chy07g01392 155 CDD ABC_SMC6_euk 59 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00988 Chy-Chr4:14524124 Chy07g01392 Chy-Chr7:18541073 1.93E-86 dispersed
Chy07g01392 Chy-Chr7:18541073 Chy08g00049 Chy-Chr8:1775008 5.95E-50 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01392 K22804 - csv:101208493 306.99