Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g01392 | GCTTGCAAGAAAGCTCTTCAGCTACGGTGGAACAAGTTTGAAAGGAATGCTAGTCTTTTGAAGCGCCAATTGACTTGGCAATTTAATGGCCATTTAAGAAAAAAAGGGATCAGCGGACATATAAAAGTTAATTATGAGGAAAAGACCCTCTCAGTTGAGGTGAAGATGCCCCAGGATGCATCCAGCAGTTCTGTTCGTGATACTCGTGGACTTTCAGGTGGAGAACGATCATTTTCAACTCTATGCTTTGCTTTGGCATTGCACGAGATGACAGAAGCCCCATTTCGAGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTAAGTCGGAAAATTAGCTTAGACACTCTTGTGGATTTTGCATTGGCACAAGGCTCCCAATGGATATTTATCACGCCTCATGACATCGGGGTGGTAAAACAAGGAGAAAGAATCAAGAAGCAACAAATGGCAGCTCCTCGATCGTGA | 468 | 43.38 | ACKKALQLRWNKFERNASLLKRQLTWQFNGHLRKKGISGHIKVNYEEKTLSVEVKMPQDASSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFITPHDIGVVKQGERIKKQQMAAPRS* | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 18541073 | 18542391 | + | Chy7G142220.1 | Chy07g01392 | 231403 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g01392 | 155 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B | 1 | 155 | IPR027132 | GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915 | |
Chy07g01392 | 155 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 22 | 146 | IPR027417 | - | |
Chy07g01392 | 155 | Gene3D | - | 2 | 151 | IPR027417 | - | |
Chy07g01392 | 155 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 | 1 | 155 | - | - | |
Chy07g01392 | 155 | CDD | ABC_SMC6_euk | 59 | 155 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g00988 | Chy-Chr4:14524124 | Chy07g01392 | Chy-Chr7:18541073 | 1.93E-86 | dispersed | |
Chy07g01392 | Chy-Chr7:18541073 | Chy08g00049 | Chy-Chr8:1775008 | 5.95E-50 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g01392 | K22804 | - | csv:101208493 | 306.99 |