Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01410 ATGAGATTTTCACTTTCTCCCATTTTCAAATCCCCCGCCATTATCATACCTCCCCAATTCTCCTTCTCCTTCTCCGTCGCCGCCGCCATGTCCTCTTCCGATCACTCTCCCCCTGCCTTCGACCGTCCTCGCTCCGTCATCAAAAAGATTCTCGCTAAACTCCAACACGAAGGTGACGGCGCCGTCGTTCGTCGCGGCATCGGAAGGAATGATTTGAAGAATCTAGATCCGTTTCTTATGCTCGATGATTTCTCCGGTAATTTCAATTCGGAATCTGACTGGTTGTTGTTTCTGAATTCGTTTTCTCCGTTTCTTGTTTTATTGAATAATTTTGTTTTCCGATTGTTTCATTCCTTTATTGCAGTCAGTCCGCCTGCTGGATTTCCCGATCATCCTCACCGAGGTTTTGAGACAGTGACATATATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCAGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAACTTTGGATCAATCTAGCATCCCATGACAAAATGATGGAGCCAAGGTATCAGGAGATCTCAAGCGACAACATTCCAAGAGCGGAGAAAGAGGGTGTGGAAGTTCGTGTGATAGCAGGAGAATCCATGGGAGTTCATTCTCCAATCTACACAAGAACTCCAACCATGTACCTTGACTTCACTTTGAGACCAAGAGCTCAAGTGCATCAAAGCATCCCAGACACATGGACATCTTTCGTGTACATAATAGAGGGGGAAGGTGTGTTCGGGTCGTCGAACTCGCCGCGGGTAGCAGCACACCATGTTCTAGTATTGGGAGATGGAGATGGGGTAAGTGTGTGGAACAGATCTTCAAAGCCATTGAGGTTTGTATTGGTTGCGGGGAAGCCATTGAACGAACCGATAGTTCAATATGGACCATTTGTTATGAACTCACAATCTGAAATCGACCAAGCAATTGAAGACTACCATTATGCTAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA 1083 45.71 MRFSLSPIFKSPAIIIPPQFSFSFSVAAAMSSSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSGNFNSESDWLLFLNSFSPFLVLLNNFVFRLFHSFIAVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISSDNIPRAEKEGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLRPRAQVHQSIPDTWTSFVYIIEGEGVFGSSNSPRVAAHHVLVLGDGDGVSVWNRSSKPLRFVLVAGKPLNEPIVQYGPFVMNSQSEIDQAIEDYHYAKNGFEMAKYWRSQ* 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18629634 18631563 - Chy7G142400.1 Chy07g01410 231421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01410 360 Gene3D Jelly Rolls 214 319 IPR014710 -
Chy07g01410 360 PANTHER PIRIN-LIKE PROTEIN 114 360 - -
Chy07g01410 360 PANTHER PIRIN-LIKE PROTEIN 33 85 - -
Chy07g01410 360 PANTHER PIRIN-RELATED 114 360 IPR012093 -
Chy07g01410 360 CDD cupin_pirin_N 61 194 - -
Chy07g01410 360 Pfam Pirin C-terminal cupin domain 245 349 IPR008778 -
Chy07g01410 360 Gene3D Jelly Rolls 99 345 IPR014710 -
Chy07g01410 360 Pfam Pirin 70 192 IPR003829 -
Chy07g01410 360 PIRSF Pirin 98 358 IPR012093 -
Chy07g01410 360 PIRSF Pirin 42 93 IPR012093 -
Chy07g01410 360 PANTHER PIRIN-RELATED 33 85 IPR012093 -
Chy07g01410 360 CDD cupin_pirin_C 242 318 - -
Chy07g01410 360 SUPERFAMILY RmlC-like cupins 44 358 IPR011051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01076 Chy-Chr1:12142885 Chy07g01410 Chy-Chr7:18629634 2.52E-143 dispersed
Chy07g01410 Chy-Chr7:18629634 Chy06g01869 Chy-Chr6:22566950 9.26E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01410 K06911 - csv:101205861 608.601