Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01453 ATGGCAAACTCGATGGCTAGATCTTTTCTGCAGGTTGCTGCTACGGAAGAAGTTGCTTCCCCTCTTCGTGTTGTTCAGATTGAAGGATTGGTTATACTGAAGATAATCAAGCATTGTAAGGAGTTTTCACCAGCTCTTGTGACCGGGCAACTTCTTGGGCTAGATGTTGGCAGTGTTCTTGAAGTGACTAATTGCTTTCCCTTCCCGACTCGGGAGGAGGATGAGGAGATTGAAGCCGATGGTGCTAATTACCAGCTTGAAATGATGAGATGCTTGAGAGAAGTCAATGTTGACAACAACACTGTTGGATGGTACCAGTCAACCTTCTTAGGTTCATATCAGACTGTAGAGCTGATTGAGACGTTTATGAATTATCAGGAAAATATTAGGCGGTGCGTCTGCATAATTTATGACCCATCAAGGTCTAATCAAGGCGTCTTAGCTCTTAAGGCATTGAAACTCTCAGATTCTTTTATGGAACTTTACCGCACCAACAGCTTTACTGGAGAGAAATTGAGGGAGAAGAACTTATCGTGGGTGGATATTTTTGAGGAAATACCTATCAAAGTTTCAAATTCTGCCCTCATTAGTGCTTTTATGACAGAGCTTGAATCTGACTCTGCAGTCACCCAGTGTGATTATGACCGCTTGCAACTTTCAACCAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCAGTCGAGCAACAGAAGTTCCAATTTTACTATCGGAGCCTGACCCGTCAGCAAGCTCAGCAACAATCATGGCTTCAAAAGAGAAGAGCCGAAAACATGACGAGGAAGGCCGCAGGAGAAGAGCCTCTCCCTGAGGAGGATCCTACAAACCCCATCTTTAAACCAATCCCCGAGCCATCACGTTTGGATAGCTATCTCATAACAAATCAAATAGCAAACTACTGCAATCAAATTAATGG 956 43.1 MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELESDSAVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPIPEPSRLDSYLITNQIANYCNQINX 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18955058 18957622 + Chy7G142830.1 Chy07g01453 231464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01453 319 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 20 319 IPR027524 GO:0003743|GO:0005737|GO:0005852
Chy07g01453 319 MobiDBLite consensus disorder prediction 268 282 - -
Chy07g01453 319 CDD MPN_eIF3h 23 286 IPR027524 GO:0003743|GO:0005737|GO:0005852
Chy07g01453 319 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 4 318 - -
Chy07g01453 319 MobiDBLite consensus disorder prediction 264 296 - -
Chy07g01453 319 Pfam C-terminal region of eIF3h 143 318 IPR045810 -
Chy07g01453 319 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 4 318 - -
Chy07g01453 319 ProSiteProfiles MPN domain profile. 25 158 IPR037518 -
Chy07g01453 319 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 23 126 IPR000555 GO:0005515|GO:0008233|GO:0008237
Chy07g01453 319 Gene3D Cytidine Deaminase, domain 2 1 216 - -
Chy07g01453 319 SMART pad1_6 24 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01453 Chy-Chr7:18955058 Chy04g02225 Chy-Chr4:27063819 6.46E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01453 K03247 - csv:101211860 633.639