Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g01479 | ATGATGGAAAATTTCCCTAATTTTCTCTCAACTTCATCCTCTTCATCCGCCCTTTCTCTCCAACAAATCTTGTTTTCTCGAGCTTCCAACCACGGGGGAGACCATTTTCGACAGCCACCGTCCGTCTCTGATGGGTTTCCGATGTTATTTCGTGACGTTTCGACAGACGACATGTCGTTTGATGCAACGAGTAGTGTGAAGGATGATGATCGTAATAATGTTGTTGTTTCGGTTAGTGAAAGGTTTCGTGTTGATGGGTCGTCGGGTAGAAGTGGAGTAGTGGAATATGGGTTGAAGAAGGAGGAGGGGGAGGTGAGGGGACGAGGGGAGGATTGTGATAAGAAGAAGAAGATGAGAAATAGAAGATTTGCTTTTCAAACAAGAAGTCAAGTTGATATTCTTGATGATGGTTATCGATGGAGGAAGTATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGCTACTATAGATGTACACACCAAGGATGCAAAGTGAAGAAGCAAGTTCAAAGGCTAACAAGAGATGAAGGAGTGGTGGTGACAACTTATGAAGGCATTCATTCTCATCCCATTGAGAAATCCACTGATAATTTTGAGCATATTTTGTCTCAAATGCAAATTTACACTACTTCTTATTGA | 645 | 42.02 | MMENFPNFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPSVSDGFPMLFRDVSTDDMSFDATSSVKDDDRNNVVVSVSERFRVDGSSGRSGVVEYGLKKEEGEVRGRGEDCDKKKKMRNRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY* | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 19127167 | 19128798 | - | Chy7G143090.1 | Chy07g01479 | 231490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g01479 | 214 | Pfam | WRKY DNA -binding domain | 135 | 192 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy07g01479 | 214 | SUPERFAMILY | WRKY DNA-binding domain | 126 | 193 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy07g01479 | 214 | Gene3D | WRKY domain | 118 | 193 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy07g01479 | 214 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 77 | 210 | - | - | |
Chy07g01479 | 214 | ProSiteProfiles | WRKY domain profile. | 129 | 194 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy07g01479 | 214 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 77 | 210 | IPR044810 | GO:0003700 | |
Chy07g01479 | 214 | SMART | WRKY_cls | 134 | 193 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00143 | Chy-Chr6:922569 | Chy07g01479 | Chy-Chr7:19127167 | 5.96E-36 | dispersed | |
Chy06g01543 | Chy-Chr6:17107919 | Chy07g01479 | Chy-Chr7:19127167 | 9.14E-60 | dispersed | |
Chy07g01479 | Chy-Chr7:19127167 | Chy06g00766 | Chy-Chr6:5293301 | 2.88E-33 | dispersed | |
Chy10g00300 | Chy-Chr10:7616440 | Chy07g01479 | Chy-Chr7:19127167 | 5.05E-16 | dispersed | |
Chy07g01479 | Chy-Chr7:19127167 | Chy07g01199 | Chy-Chr7:16844695 | 1.20E-37 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18363 | PF03106 | WRKY | 1.20E-25 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g01479 | - | - | csv:101219926 | 395.586 |