Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01479 ATGATGGAAAATTTCCCTAATTTTCTCTCAACTTCATCCTCTTCATCCGCCCTTTCTCTCCAACAAATCTTGTTTTCTCGAGCTTCCAACCACGGGGGAGACCATTTTCGACAGCCACCGTCCGTCTCTGATGGGTTTCCGATGTTATTTCGTGACGTTTCGACAGACGACATGTCGTTTGATGCAACGAGTAGTGTGAAGGATGATGATCGTAATAATGTTGTTGTTTCGGTTAGTGAAAGGTTTCGTGTTGATGGGTCGTCGGGTAGAAGTGGAGTAGTGGAATATGGGTTGAAGAAGGAGGAGGGGGAGGTGAGGGGACGAGGGGAGGATTGTGATAAGAAGAAGAAGATGAGAAATAGAAGATTTGCTTTTCAAACAAGAAGTCAAGTTGATATTCTTGATGATGGTTATCGATGGAGGAAGTATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGCTACTATAGATGTACACACCAAGGATGCAAAGTGAAGAAGCAAGTTCAAAGGCTAACAAGAGATGAAGGAGTGGTGGTGACAACTTATGAAGGCATTCATTCTCATCCCATTGAGAAATCCACTGATAATTTTGAGCATATTTTGTCTCAAATGCAAATTTACACTACTTCTTATTGA 645 42.02 MMENFPNFLSTSSSSSALSLQQILFSRASNHGGDHFRQPPSVSDGFPMLFRDVSTDDMSFDATSSVKDDDRNNVVVSVSERFRVDGSSGRSGVVEYGLKKEEGEVRGRGEDCDKKKKMRNRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTSY* 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19127167 19128798 - Chy7G143090.1 Chy07g01479 231490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01479 214 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy07g01479 214 SUPERFAMILY WRKY DNA-binding domain 126 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy07g01479 214 Gene3D WRKY domain 118 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy07g01479 214 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 77 210 - -
Chy07g01479 214 ProSiteProfiles WRKY domain profile. 129 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy07g01479 214 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 210 IPR044810 GO:0003700
Chy07g01479 214 SMART WRKY_cls 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00143 Chy-Chr6:922569 Chy07g01479 Chy-Chr7:19127167 5.96E-36 dispersed
Chy06g01543 Chy-Chr6:17107919 Chy07g01479 Chy-Chr7:19127167 9.14E-60 dispersed
Chy07g01479 Chy-Chr7:19127167 Chy06g00766 Chy-Chr6:5293301 2.88E-33 dispersed
Chy10g00300 Chy-Chr10:7616440 Chy07g01479 Chy-Chr7:19127167 5.05E-16 dispersed
Chy07g01479 Chy-Chr7:19127167 Chy07g01199 Chy-Chr7:16844695 1.20E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18363 PF03106 WRKY 1.20E-25 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01479 - - csv:101219926 395.586