Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01485 ATGGCATTGGTGGCGAGGCTCAAACTTCTTTCACTCCCATCTTCTCTTCCCTCTCTTCATTTCCCCTCATTGCCATTCCCATCTTCTGCTACAATATTTGCATCTCAATCCATCAACACTAACCCAAGTTTCAAATTCAGAATGGCTTCTTCTTCTTCATCTTCTTCTTACGGCAAAGTTATCGATTCACATCTCCATGTCTGGGCATCTCCTGAAGAGGCTGCTGCAAAATACCCTTACTTTCCAGGCCAAGAACCCACCTTGACTGGGCATGTTGATTTCTTGCTTCAGTCTATGGAAGAAGCAGGAGTAGATGGTGCACTTATTGTCCAGCCAATCAACCACAAATTTGATCACTCTTATGTGACCAGTGTATTAAATAAATATCCAAACAAATTCGTTGGTTGTTGCCTAGCAAATCCAGCCAAAGATGGAAGTGGAATTCAGCAACTCGAACATCTTGTAACAAAGGATGGATACTCCGCTGTTCGCTTTAATCCGTACTTATGGCCGTCAGGTCAAAAGATGACAAATGAGGTGGGGAAAGCATTATTCTCCACAGCAGGAAAACTTGGGATTCCTGTGGGTTTCATGTGCATGAAGGGGCTAAGCCTTCATGTTGAAGAGATAAAAGAGCTTTGTACAGAGTTCCCTTCAACCACTGTACTGCTTGATCACTTGGGTTTTTGCAAACCCCCAGAAAATGAAGAAGATAGTCTTGCACTGTCCCACCTTTTGGAGCTAGCAACTTTTCCCCAGATATATGTGAAATTCAGTGCTCTATTTAGGGTGTCAAGAAGGCCATTTCCATACTTGGATTTGTCCCGCCTCCTCTCTCAGATTGTATCCAGCTTTGGAGCAAACCGCATCATGTGGGGAAGTGACTTCCCCTTCGTTGTTCTTGAATGCGGATATAAAGGAGCAATTGATGCAGTAACATTAATAGCCAATGAAATATCTCTTTCTTCTGGCGAGTTGGAGTGGATTAAAGGCAAAACTGTGGCTCATCTGTTCCAAAGTCGATGGATATCTTCTTAA 1038 43.16 MALVARLKLLSLPSSLPSLHFPSLPFPSSATIFASQSINTNPSFKFRMASSSSSSSYGKVIDSHLHVWASPEEAAAKYPYFPGQEPTLTGHVDFLLQSMEEAGVDGALIVQPINHKFDHSYVTSVLNKYPNKFVGCCLANPAKDGSGIQQLEHLVTKDGYSAVRFNPYLWPSGQKMTNEVGKALFSTAGKLGIPVGFMCMKGLSLHVEEIKELCTEFPSTTVLLDHLGFCKPPENEEDSLALSHLLELATFPQIYVKFSALFRVSRRPFPYLDLSRLLSQIVSSFGANRIMWGSDFPFVVLECGYKGAIDAVTLIANEISLSSGELEWIKGKTVAHLFQSRWISS* 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19171480 19174408 + Chy7G143150.1 Chy07g01485 231496

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01485 345 Pfam Amidohydrolase 61 333 IPR006680 GO:0016787
Chy07g01485 345 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 56 344 IPR032465 GO:0016831
Chy07g01485 345 Gene3D - 50 341 - -
Chy07g01485 345 PANTHER CATALYTIC/ HYDROLASE 56 344 - -
Chy07g01485 345 SUPERFAMILY Metallo-dependent hydrolases 60 338 IPR032466 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01485 - - - csv:101220161 650.588
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1303 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00294 . . . . . . . . . . . . . . . . . . Cpe03g01218 . . . . . . . . . . . . . . . . Chy07g01485 Cme07g01922
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 5 1 1 33