Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01488 ATGGAGAAAAACCCACCCCCAGAAAAGTCTGATAGTTTTTCTAAAAATTTCAATAGAAGAATTGCTAATTTGGGCTCACCTCGTCGCACTCCTGACGCCACCCCCGTCGCTGCTGATGCAAATTCCGAAAAGCTTGCTGCTGATAGAGATGATGATGCCTTCATTGAAGACCCTCCTTCCGAATCTGATACCCTATTGATTTTCGAAGAGGTTGATCAATTCCTTGAGACTTTGTCCAATGTTGGAGATGATGGATCGAATGTAGTCCATGAAATTCCGAGTTCGGTTCATTCCTTGTCCAAAATGGTGGATTCCATGATCTCTAGATACAGTTCTAATAAATATCCGGCGAAGCTTGGTAAAGATCCCGACAGGGATTCTTGCTTTTTCGAAGCATTAGGTCGGATTGCCAAGATTGCGATTAAATTAAGTGAATTCCCTACCAGCACTGCTTCCATTCCTTCTCTAAATCGGACCACCACGGCTGTACAGCGAGCGATGTCGTTATTGGATGAAGAATTCAGTACCCTTTTGAAAGAATGCAAATATCGGGAGCTTGATTCTAAATCGGACAAGAAAGCATCTAAGCAATCGTCGTTCAAAACAATCAACGAATCAACAGATCAACAAAACAGCACCGTACCTGAATCATCTGAGCCTGATTCTGCCAGGGAAGAGATGTTCCCCTCTTTTTCGCAGGACACTGTATCGTACATGAAAAGAATTGCCGGAACAATGATCACTGCCGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTACGTCAGAGCTCGTTCAAAGGAATATTGAACCAGCTTGGGTATGAAAGTATTAGCATCGACGAGATTCAAAAAATGCAATGGGAAACACTTCAAACGGAAATCGACAAATGGATCGCCGTCGTAAAGAAATGCTCAAAATCTCTGTTCCCAGGTGAGTGGAAGCTTTGTGACTCTGTTTTCACCGATCATCCCTTCATTTCTCATACGTTATTCAGCAATTTAACAAGAGCAGTAGTCATCAAGCTTCTCAACTTTGCGAACGCCGTCGTTTTAACAAAACGGTCGGCGGAGAAGATGTTCAAATTACTTGACATGTACGAAACCATCCGCGATTTAATTCCGACGATCAATGGCTTCCCTGAAAATTGCAGAACAGAGCTAATTACCGAAGCGGAAGGGGCAAAAAACGGGATAGGCGAAGCAATAGTCGGCATTTTCTACGATCTAGAGAACTCAATCAAAAGTGACAACGCGAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTAACACGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTGTTCCAATTTCTCGACCCTAAAGTCGAAGAAGACCGAACAGCAAGAATGGACGAGAACGACGACGCATCACCAAGAAAATCTCAACTCGCAATTCAGATCGCCATGGTAATGGAACTACTGGACGCAAATTTGACAATGAGATCGAAACTATACCGCGACGCATCTCTTCGGTACATTTTCCTGATGAACAACGGAAGATACATAGTACAGAAAATCAAAGGGTCATGTGGAATTACGGAGTTGATGGGGGACCGTTGGTGCAGGAAACGATCGACGAATCTGCGACAATACCATAAAAATTACCAGAGAGAAACATGGAGTAAGGTGTTGCAGTGTTTAAACCACGAAGGATTGCTGGTGAACGGGAAAGTATCGAAGCCGATATTGAAGGAGAGATTCAAAAGCTTTAACGCGATGTTCGATGAAATACACAAAACGCAAAGCAGTTGGGTAGTAAGTGACGAGCAGCTTCAATCGGAGCTTAGGATATCGGTGTCGGCGGTGATGATTCCAGCGTACCGTTCATTCGTAGGGAGATTCAAGCAGCATTTTGATGCGGGAAGACAATCGGAGAAGTACATAAAGTATCAACCTGAAGACATTGAAGGTTTGATTGATGATCTGTTTGATGGAAATACTGCGTCTATGGGAAGAAGAAGAACGTAA 2025 43.31 MEKNPPPEKSDSFSKNFNRRIANLGSPRRTPDATPVAADANSEKLAADRDDDAFIEDPPSESDTLLIFEEVDQFLETLSNVGDDGSNVVHEIPSSVHSLSKMVDSMISRYSSNKYPAKLGKDPDRDSCFFEALGRIAKIAIKLSEFPTSTASIPSLNRTTTAVQRAMSLLDEEFSTLLKECKYRELDSKSDKKASKQSSFKTINESTDQQNSTVPESSEPDSAREEMFPSFSQDTVSYMKRIAGTMITAGYEKECCMSYSFLRQSSFKGILNQLGYESISIDEIQKMQWETLQTEIDKWIAVVKKCSKSLFPGEWKLCDSVFTDHPFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETIRDLIPTINGFPENCRTELITEAEGAKNGIGEAIVGIFYDLENSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKVEEDRTARMDENDDASPRKSQLAIQIAMVMELLDANLTMRSKLYRDASLRYIFLMNNGRYIVQKIKGSCGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLNHEGLLVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDAGRQSEKYIKYQPEDIEGLIDDLFDGNTASMGRRRT* 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19186467 19188491 + Chy7G143180.1 Chy07g01488 231499

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01488 674 Pfam Exo70 exocyst complex subunit 298 660 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy07g01488 674 MobiDBLite consensus disorder prediction 1 15 - -
Chy07g01488 674 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 673 IPR004140 GO:0000145|GO:0006887
Chy07g01488 674 SUPERFAMILY Cullin repeat-like 125 663 IPR016159 -
Chy07g01488 674 MobiDBLite consensus disorder prediction 194 225 - -
Chy07g01488 674 MobiDBLite consensus disorder prediction 1 59 - -
Chy07g01488 674 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 60 673 - -
Chy07g01488 674 MobiDBLite consensus disorder prediction 199 218 - -
Chy07g01488 674 Gene3D Exocyst complex component Exo70 114 672 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01488 K07195 EXOC7, EXO70; exocyst complex component 7 - csv:101220402 1315.83
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01488 Chy-Chr7:19186467 Chy12g00323 Chy-Chr12:3489766 2.41E-121 dispersed
Chy07g01488 Chy-Chr7:19186467 Chy12g00132 Chy-Chr12:1479268 3.21E-76 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy10g01231 . 14 652 EXO70 exocyst subunit family AT5G03540 76.7 1.0e-285 979.2
Chy08g00976 . 1 640 EXO70 exocyst subunit family AT5G03540 70.9 2.3e-264 908.3
Chy08g00976 . 1 640 EXO70 exocyst subunit family AT5G52340 80.0 1.9e-297 1018.1
Chy10g01231 . 16 652 EXO70 exocyst subunit family AT5G52340 74.4 1.1e-271 932.6
Chy08g00976 . 145 632 EXO70 exocyst subunit family AT5G52350 63.2 1.2e-173 606.7
Chy10g01231 . 151 652 EXO70 exocyst subunit family AT5G52350 60.6 5.4e-169 591.3
Chy12g00323 . 1 630 EXO70 exocyst subunit family AT5G58430 66.3 4.9e-245 844.0
Chy12g00323 . 1 629 EXO70 exocyst subunit family AT1G07000 52.0 8.8e-175 610.5
Chy07g01488 . 60 673 EXO70 exocyst subunit family AT5G13150 53.0 1.1e-173 607.1
Chy04g00756 . 12 611 EXO70 exocyst subunit family AT1G72470 64.5 2.7e-214 741.9
Chy04g00756 . 9 607 EXO70 exocyst subunit family AT1G54090 62.0 3.7e-208 721.5
Chy04g00756 . 9 608 EXO70 exocyst subunit family AT3G14090 64.1 1.0e-218 756.5
Chy12g01170 . 18 656 EXO70 exocyst subunit family AT5G50380 62.0 1.7e-227 785.8
Chy02g01759 . 13 651 EXO70 exocyst subunit family AT5G50380 61.8 8.1e-225 776.9
Chy03g01199 . 13 683 EXO70 exocyst subunit family AT4G31540 73.1 5.9e-292 1000.0
Chy10g00590 . 58 601 EXO70 exocyst subunit family AT3G55150 51.1 9.4e-151 530.8
Chy11g01268 . 30 595 EXO70 exocyst subunit family AT3G55150 50.3 3.4e-148 522.3
Chy10g00590 . 27 601 EXO70 exocyst subunit family AT2G39380 51.5 2.2e-155 546.2
Chy04g02117 . 27 633 EXO70 exocyst subunit family AT3G09520 54.6 4.4e-177 618.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005149 2 1 3 3 3 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 41