Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01488 ATGGAGAAAAACCCACCCCCAGAAAAGTCTGATAGTTTTTCTAAAAATTTCAATAGAAGAATTGCTAATTTGGGCTCACCTCGTCGCACTCCTGACGCCACCCCCGTCGCTGCTGATGCAAATTCCGAAAAGCTTGCTGCTGATAGAGATGATGATGCCTTCATTGAAGACCCTCCTTCCGAATCTGATACCCTATTGATTTTCGAAGAGGTTGATCAATTCCTTGAGACTTTGTCCAATGTTGGAGATGATGGATCGAATGTAGTCCATGAAATTCCGAGTTCGGTTCATTCCTTGTCCAAAATGGTGGATTCCATGATCTCTAGATACAGTTCTAATAAATATCCGGCGAAGCTTGGTAAAGATCCCGACAGGGATTCTTGCTTTTTCGAAGCATTAGGTCGGATTGCCAAGATTGCGATTAAATTAAGTGAATTCCCTACCAGCACTGCTTCCATTCCTTCTCTAAATCGGACCACCACGGCTGTACAGCGAGCGATGTCGTTATTGGATGAAGAATTCAGTACCCTTTTGAAAGAATGCAAATATCGGGAGCTTGATTCTAAATCGGACAAGAAAGCATCTAAGCAATCGTCGTTCAAAACAATCAACGAATCAACAGATCAACAAAACAGCACCGTACCTGAATCATCTGAGCCTGATTCTGCCAGGGAAGAGATGTTCCCCTCTTTTTCGCAGGACACTGTATCGTACATGAAAAGAATTGCCGGAACAATGATCACTGCCGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTACGTCAGAGCTCGTTCAAAGGAATATTGAACCAGCTTGGGTATGAAAGTATTAGCATCGACGAGATTCAAAAAATGCAATGGGAAACACTTCAAACGGAAATCGACAAATGGATCGCCGTCGTAAAGAAATGCTCAAAATCTCTGTTCCCAGGTGAGTGGAAGCTTTGTGACTCTGTTTTCACCGATCATCCCTTCATTTCTCATACGTTATTCAGCAATTTAACAAGAGCAGTAGTCATCAAGCTTCTCAACTTTGCGAACGCCGTCGTTTTAACAAAACGGTCGGCGGAGAAGATGTTCAAATTACTTGACATGTACGAAACCATCCGCGATTTAATTCCGACGATCAATGGCTTCCCTGAAAATTGCAGAACAGAGCTAATTACCGAAGCGGAAGGGGCAAAAAACGGGATAGGCGAAGCAATAGTCGGCATTTTCTACGATCTAGAGAACTCAATCAAAAGTGACAACGCGAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTAACACGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTGTTCCAATTTCTCGACCCTAAAGTCGAAGAAGACCGAACAGCAAGAATGGACGAGAACGACGACGCATCACCAAGAAAATCTCAACTCGCAATTCAGATCGCCATGGTAATGGAACTACTGGACGCAAATTTGACAATGAGATCGAAACTATACCGCGACGCATCTCTTCGGTACATTTTCCTGATGAACAACGGAAGATACATAGTACAGAAAATCAAAGGGTCATGTGGAATTACGGAGTTGATGGGGGACCGTTGGTGCAGGAAACGATCGACGAATCTGCGACAATACCATAAAAATTACCAGAGAGAAACATGGAGTAAGGTGTTGCAGTGTTTAAACCACGAAGGATTGCTGGTGAACGGGAAAGTATCGAAGCCGATATTGAAGGAGAGATTCAAAAGCTTTAACGCGATGTTCGATGAAATACACAAAACGCAAAGCAGTTGGGTAGTAAGTGACGAGCAGCTTCAATCGGAGCTTAGGATATCGGTGTCGGCGGTGATGATTCCAGCGTACCGTTCATTCGTAGGGAGATTCAAGCAGCATTTTGATGCGGGAAGACAATCGGAGAAGTACATAAAGTATCAACCTGAAGACATTGAAGGTTTGATTGATGATCTGTTTGATGGAAATACTGCGTCTATGGGAAGAAGAAGAACGTAA 2025 43.31 MEKNPPPEKSDSFSKNFNRRIANLGSPRRTPDATPVAADANSEKLAADRDDDAFIEDPPSESDTLLIFEEVDQFLETLSNVGDDGSNVVHEIPSSVHSLSKMVDSMISRYSSNKYPAKLGKDPDRDSCFFEALGRIAKIAIKLSEFPTSTASIPSLNRTTTAVQRAMSLLDEEFSTLLKECKYRELDSKSDKKASKQSSFKTINESTDQQNSTVPESSEPDSAREEMFPSFSQDTVSYMKRIAGTMITAGYEKECCMSYSFLRQSSFKGILNQLGYESISIDEIQKMQWETLQTEIDKWIAVVKKCSKSLFPGEWKLCDSVFTDHPFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETIRDLIPTINGFPENCRTELITEAEGAKNGIGEAIVGIFYDLENSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKVEEDRTARMDENDDASPRKSQLAIQIAMVMELLDANLTMRSKLYRDASLRYIFLMNNGRYIVQKIKGSCGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLNHEGLLVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDAGRQSEKYIKYQPEDIEGLIDDLFDGNTASMGRRRT* 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19186467 19188491 + Chy7G143180.1 Chy07g01488 231499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01488 674 Pfam Exo70 exocyst complex subunit 298 660 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy07g01488 674 MobiDBLite consensus disorder prediction 1 15 - -
Chy07g01488 674 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 673 IPR004140 GO:0000145|GO:0006887
Chy07g01488 674 SUPERFAMILY Cullin repeat-like 125 663 IPR016159 -
Chy07g01488 674 MobiDBLite consensus disorder prediction 194 225 - -
Chy07g01488 674 MobiDBLite consensus disorder prediction 1 59 - -
Chy07g01488 674 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 60 673 - -
Chy07g01488 674 MobiDBLite consensus disorder prediction 199 218 - -
Chy07g01488 674 Gene3D Exocyst complex component Exo70 114 672 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01488 Chy-Chr7:19186467 Chy12g00323 Chy-Chr12:3489766 2.41E-121 dispersed
Chy07g01488 Chy-Chr7:19186467 Chy12g00132 Chy-Chr12:1479268 3.21E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01488 K07195 - csv:101220402 1315.83