Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01499 ATGATTGCCAGCTCTCTTTGCAATGCTTCCGCTAAATTCCCGGCAGAAGTGATGGAGGTTGAAACGATGATGGAACAGAAGAGGAGTCTATGCTCGGTTGATGAGAGCGCTCTTACTTCACTTACACCCAAACGGCACAAGACTGATTTCTCTATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAAGCAATGGAATATATCCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCACCATATCTCCAAAGCACACCCACTATTTTGTTGCAGGAGGTGGAGCCATGCAGCCATAGCCTGAGGAGCAGAGGCCTTTGTCTTGTTCCAATCTCGTGTACTGCTGGAGTTGCACGGAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCTCCCAAATTTGAGAAGCACATCTCACCATTCAATTGA 504 46.63 MIASSLCNASAKFPAEVMEVETMMEQKRSLCSVDESALTSLTPKRHKTDFSISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTILLQEVEPCSHSLRSRGLCLVPISCTAGVARSNGADIWAPVKTISPKFEKHISPFN* 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19264481 19268408 - Chy7G143290.1 Chy07g01499 231510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01499 167 Gene3D - 42 110 IPR036638 GO:0046983
Chy07g01499 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Chy07g01499 167 SMART finulus 53 100 IPR011598 GO:0046983
Chy07g01499 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 108 IPR036638 GO:0046983
Chy07g01499 167 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 17 151 - -
Chy07g01499 167 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Chy07g01499 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00105 Chy-Chr1:696755 Chy07g01499 Chy-Chr7:19264481 6.07E-32 dispersed
Chy01g00106 Chy-Chr1:697118 Chy07g01499 Chy-Chr7:19264481 4.92E-36 dispersed
Chy07g01499 Chy-Chr7:19264481 Chy10g00019 Chy-Chr10:731682 1.98E-28 dispersed
Chy07g01499 Chy-Chr7:19264481 Chy02g00358 Chy-Chr2:2306620 3.46E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01499 - - csv:101218499 328.946