Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01540 ATGGCCCAGAAGGTTTGTGCTAACCAAAATGGTTCGGTGGAGAGCTTGTGCAATAGCCATCAGGATCCACTCAACTGGGGTTTGGCAGCTGAGTCCATGAAGGGAAGTCATTTAGATGAGGTGAAACGGATGGTGGAAGAATATCGAAGGCCTCTGGTGAAGCTTGGAGGAGAAACTCTCACCATTTCTCAGGTTGCTGCCATTGCCACTCGTGATAATGATGTTCTTGTGGAATTGGCTGAGTCTGCAAGGGCTGGTGTCAAAGCTAGCAGTGATTGGGTGATGGAGAGCATGGGTAAAGGCACTGATAGTTATGGTGTCACTACTGGCTTTGGTGCTACTTCCCATAGAAGAACCAATCAAGGTGGAGCTCTTCAAAAGGAGTTGATTCGATTTTTGAATTCTGGCATCTTTGGAAATGGAAGTGAATCGAATCACACTTTGCCTCACTCCGCAACAAGAGCTGCTATGTTGGTGAGAATCAACACTCTACTTCAAGGGTATTCTGGCATTCGATTCGAGATTTTGGAAGCGATTACTAATCTCTTGAACCACAACGTCACTCCATGTTTGCCACTTAGAGGAACAATTACTGCTTCTGGAGATTTGGTTCCTTTGTCTTATATTGCGGGGTTGCTTACCGGTCGTCACAATTCAAAAGCTATTGGACCTAATGGAGAAACCCTTGACGCAAAGACTGCTTTTGAACAAGCTGGTATTGATTCCGGGTTCTTTGAGTTGCAGCCTAAGGAAGGTCTTGCTCTTGTTAATGGCACTGCAGTCGGTTCTGGATTGGCTTCCATTGTTCTCTTTGAGGCAAATATTTTAGCCGTTTTGTCTGAAATTTTATCTGCAATATTTGCTGAGGTGATGCAAGGAAAGCCCGAATTCACCGACCATTTGACCCATAAGTTGAAGCACCACCCTGGTCAAATTGAAGCAGCTGCAATCATGGAGCACATTTTAGATGGAAGCTCTTACATGAAAACGGCAAAGAAATTGCATGAAATGGATCCTCTCCAAAAGCCCAAACAAGATCGTTACGCTCTTAGAACTTCTCCTCAATGGTTGGGTCCTTTGATTGAAGTGATTCGTTTCTCCACCAAGTCAATTGAGCGGGAAATTAATTCAGTCAATGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCGCTACATGGAGGTAACTTCCAAGGAACGCCGATTGGAGTTTCTATGGACAACACTCGTTTGGCTATTGCATCAATTGGAAAGCTCATGTTTGCCCAATTTTCAGAACTTGTCAATGATTTTTACAATAACGGTTTGCCTTCTAACCTTTCTGCAAGTAGAAATCCAAGCTTGGATTATGGCTTTAAAGGTGCTGAAATTGCCATGGCTTCATACTGCTCTGAGCTTCAATATCTTGCAAATCCTGTGACAAGTCACGTCCAAAGCGCAGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCCTCAAGGAAAACAGCTGAAGCCATCGATATTCTTAAACTCATGTCTTCCACATTCTTAGTTGCTTTATGTCAAGCAATTGACTTGAGGCATTTGGAGGAAAACTTGAAGAGCGCGGTGAAAAGCACAGTTAGCCAAGTAGCAAAAAAAGTGTTGACTACCTCTTCCAATGGCGCACTTCATCCATCAAGATTTTGTGAGAAAGATTTACTCAAAGTTGTTGACAGAGAATACACTTTTGCATACATAGATGATCCATGCAGTGCTACCTACCCTCTTATGCAAAAGCTAAGGCAAATTCTTGTCGAGCATGCACTTAAAAATGGCGATAGAGAAACGAACGAAAACACCTCAATCTTCCAAAAGATTGGTGCTTTCGAAGAGGAGTTGAAGGCAATCTTACCAAAGGAGGTAGAAAACGTAAGGTTGGCATATGAGAATGGAAATTCTAAAATTGAAAATCAAATCAAGGATTGCAGGTCTTACCCATTATACAAATTTATTAGAGAGGAGTTGGGAACAAAATTGCTAACCGGCGAAAGGGTAATTTCTCCGGGAGAAGAGTGCGAGAAGGTATTCACTGCTTTAAGTCAAGGAAAGATGATCGACTCTATCTTCGAATGCTTGAAAGAGTGGAATGGAGCACCAATCCCCATTTGTTAA 2142 42.44 MAQKVCANQNGSVESLCNSHQDPLNWGLAAESMKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNDVLVELAESARAGVKASSDWVMESMGKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNSGIFGNGSESNHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITNLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAIGPNGETLDAKTAFEQAGIDSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSAVKSTVSQVAKKVLTTSSNGALHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLMQKLRQILVEHALKNGDRETNENTSIFQKIGAFEEELKAILPKEVENVRLAYENGNSKIENQIKDCRSYPLYKFIREELGTKLLTGERVISPGEECEKVFTALSQGKMIDSIFECLKEWNGAPIPIC* 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19659490 19661631 - Chy7G143700.1 Chy07g01540 231551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01540 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
Chy07g01540 713 CDD PAL-HAL 58 523 IPR001106 -
Chy07g01540 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Chy07g01540 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 22 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Chy07g01540 713 Pfam Aromatic amino acid lyase 60 535 IPR001106 -
Chy07g01540 713 PANTHER HISTIDINE AMMONIA-LYASE 18 713 IPR001106 -
Chy07g01540 713 Gene3D - 13 259 IPR024083 -
Chy07g01540 713 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 18 713 - -
Chy07g01540 713 SUPERFAMILY L-aspartase-like 22 713 IPR008948 GO:0003824
Chy07g01540 713 Gene3D - 526 647 IPR023144 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01540 Chy-Chr7:19659490 Chy08g00845 Chy-Chr8:15959396 0 dispersed
Chy07g01540 Chy-Chr7:19659490 Chy07g01541 Chy-Chr7:19661848 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01540 K10775 - csv:101204574 1390.17