Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01541 ATGGACAACACTCGTTTGGCTATTGCATCAATTGGAAAGCTCATGTTTGCCCAATTTTCAGAACTTGTCAATGATTTTTACAATAACGGTTTGCCTTCTAACCTTTCTGCAAGTAGAAATCCAAGCTTGGATTATGGCTTTAAAGGTGCTGAAATTGCCATGGCTTCATACTGCTCTGAGCTTCAATATCTTGCAAATCCCGTGACAAGTCATGTTCAAAGTGCCGAACAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCCTCAAGGAAAACATCTGAAGCCATTGATATTCTTAAACTCATGTCTTCCACATTCTTAGTTGCTTTATGCCAAGCAATTGACTTGAGGCATTTAGAGGAAAACTTGAAGAACGTTGTTAAAAGCACAATTAACCAAGTAGCAAAAAAGGTGTTGACCACATCTTCTAACGGCGCGCTTCACGCATCAAGATTTTGTGAAAAAAACCTACTTAAAGTTATTGATAGAGAATACATATTTGCATACATTGATGATCCATGCAATACTACTTACCCTCTTATACAAAAGTTGAGGCACACTCTCGTTGAGCATGCACTTGAAAATTGTGAAAATGAAGTGAACGTAAACACTTCAATCTTTCAAAAGATCGGTGCTTTCGAAGAGGAATTAAAGGCAATTTTACCGAAGGAGGTTGAAAATGTAAGGTTAGCATATGAGAATGGAAATTCTAAAATTAAAAACCAAATCAAGGATTGTAGATCCTACCCATTATACAGATTTGTAAGAGAGGAGTTAGGAACAAGATTGCTAACAGGCGAAAGGGTGATATCTCCAGGAGAAGAGTGTGAGAAGGTATTCACATCATTATGTCAAGGAAAAATGATCGACTCTATGTTTGAATGCTTGAAGGAGTGGAATGGAGCACCAATTCCAATTTGCTAA 927 37.22 MDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAIDILKLMSSTFLVALCQAIDLRHLEENLKNVVKSTINQVAKKVLTTSSNGALHASRFCEKNLLKVIDREYIFAYIDDPCNTTYPLIQKLRHTLVEHALENCENEVNVNTSIFQKIGAFEEELKAILPKEVENVRLAYENGNSKIKNQIKDCRSYPLYRFVREELGTRLLTGERVISPGEECEKVFTSLCQGKMIDSMFECLKEWNGAPIPIC* 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19661848 19662774 + Chy7G143710.1 Chy07g01541 231552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01541 308 SUPERFAMILY L-aspartase-like 1 308 IPR008948 GO:0003824
Chy07g01541 308 Gene3D - 121 242 IPR023144 -
Chy07g01541 308 Gene3D Fumarase/aspartase (Central domain) 1 303 - -
Chy07g01541 308 PANTHER HISTIDINE AMMONIA-LYASE 1 308 IPR001106 -
Chy07g01541 308 Pfam Aromatic amino acid lyase 1 129 IPR001106 -
Chy07g01541 308 PANTHER PHENYLALANINE AMMONIA-LYASE 1 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01541 Chy-Chr7:19661848 Chy08g00845 Chy-Chr8:15959396 0 dispersed
Chy07g01540 Chy-Chr7:19659490 Chy07g01541 Chy-Chr7:19661848 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01541 K10775 - csv:101204574 566.614