Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g01561 | ATGGCAGTTCTCAAGCTCATCCTCACTCATGCTCGCCGCCATTCCTTTGCCAAACCTCCTTCTCTTTCAACTCCCCACTTCCTTCACTTTCGAAGATCACTCTCTTCCTCTCAATCTGATTCTAACCCAGATCCCGATTCTCCCCCTGATCAATCCTCTCCAAGAACCTCTCGTTCCGTTCCCATTCAGCCAGTTTCCTACGCCGTCAAGCCCAAGCCACAAGCCGATGAGAACCAAGATTCCCCAGAAACGCTTCAATCTCCACCGCCTCCACAGGGGCCGCCGCCAAGGCCTGAAGGTCGGAGGACGTGGACTCGTGAGGATGTTCGATATATGAAGGATGCTCCAACTATAACTCCTGTTTCTTATGCGGCACGTGTTGCTCCGCTTCCGGAAGATACGGGTTCGGCTTCGGGTGGAGGAGAAGAGGGTGTGGTGACTGAGCAAATGGAGGAGGAAAGGAAGAAAATTGAGGCGGCGAATCAATGGAGGAGGAGGGTTTTGAGGGTTCCGGAGGAGGAGAAAGTTACTGCTCCATTTCCGATGCTGATCAAAGTCGAGAAGAAGGAACAGAAGGTAGTTCTTGATTTGATAGACGCTATCCGGCAAGTGAAGACTGCTGCCAAGGGAAATTTTGATGAGACTGTTGAAGCACATGCAAGGTTGGGGGTTGATGCTAGGAAAATGCAAGTTCTGGGTAACATGACTCTGCCCCATTCCATTGGGAAGACTGTCAAAGTGGCTTTCTTTGCTGAAGGGGCTGACGCTGAGGAAGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCGTTGAACTTATAGAGCAAATTGCAAGCAGTCGGAAATTCAATGCTGATAAGTGTTTCTCTACCCCTGAAATGATGAGGCGCATTGGCAAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAACTAGGTACTGTGACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGAAGGACACATGCATTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTGAGTCATTCGGAAGAGTTTTTACGAGAAAATATTGGTGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCCGTTGGCTTGAAAAAAGCCTCAAAATATGCTGGATATTTAAATTCCTTCCACATATGTAGCACGATGGGTCCCGGATTCCCAATCACAATACAATCATTGTCCAAAGTTGCAGATCAATACAACAGAAAGTATGAATTACTTATTGGGAGAGTTGATGCCTTCTCTCTCTTTTGGAACTTTTGTGCTATGGATACAGAGGAAGCTCCATCGACACCGGTGACGCCGGGAACTCCCGGAGCTCCGCTGTTTGGACGAGTGAAAGAAAATCAGCATGGAAGTGAGAATGGTAAAAGATCTCTTCTCAAAAGTTGCATCTCTTTCAATGTTGATGATAATTGGGGGAGTGAAGAAGGTGGCTTATCTAAAATAGTCTCTTCTTGTTCATTGCCATACCCTCCTGTCTCACTTGCAAGAAAGGTGGGAGCAGAGTTTATAGGCACTTTGATTCTCATATTTGCCGGAACTGCCACCGCCATTGTGAACCAAAAGACGGAAGGAACCGAAACGTTGATCGGCCTGGCGGCTTCCACCGGCCTTGCAGTGATGATCGTGATCTTGTCAACGGGTCACATCTCCGGAGCCCATCTGAATCCAGCTGTCACCATTGCTTTTGCTGCATTGAAGCAGTTTCCTTGGAAGCATGTGCCATTGTATATTGTAGCTCAAATGGTGGCTTCTTTGTGTTCATCATTTGCATTGAAATGGATCTTTGATCCAATAATGGGAGGAGGAGCCACTATTCCTTCATGTGGATATGCCCAAGCTTTTGCTCTTGAGTTTATTATTAGCTTCAACCTCATGTTTGTCCTCACCGCAGTCGCTACCGACACTCGAGCTGTGGGAGAGTTGGCGGGAATCGCGGTAGGAGCAACGGTTATGCTCAATGTACTCATCGCCGGACAAACAACTGGAGCTTCAATGAATCCAGTAAGAACACTGGGGCCAGCCATTGCAGTAAACAATTTCAAAGCCATATGGATTTACCTCACAGCTCCCATATTAGGGACATTGTGTGGAGCTGGAATCTACACTGCAGTTAAGTTGCCTGACAAAGATGGTGATTCACGCTTGCCTTCTACTGCAGCAAGCTTTCGACGATGA | 2223 | 47.28 | MAVLKLILTHARRHSFAKPPSLSTPHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSVPIQPVSYAVKPKPQADENQDSPETLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVPEEEKVTAPFPMLIKVEKKEQKVVLDLIDAIRQVKTAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYELLIGRVDAFSLFWNFCAMDTEEAPSTPVTPGTPGAPLFGRVKENQHGSENGKRSLLKSCISFNVDDNWGSEEGGLSKIVSSCSLPYPPVSLARKVGAEFIGTLILIFAGTATAIVNQKTEGTETLIGLAASTGLAVMIVILSTGHISGAHLNPAVTIAFAALKQFPWKHVPLYIVAQMVASLCSSFALKWIFDPIMGGGATIPSCGYAQAFALEFIISFNLMFVLTAVATDTRAVGELAGIAVGATVMLNVLIAGQTTGASMNPVRTLGPAIAVNNFKAIWIYLTAPILGTLCGAGIYTAVKLPDKDGDSRLPSTAASFRR* | 741 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 19849649 | 19859959 | + | Chy7G143910.1 | Chy07g01561 | 231572 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g01561 | 740 | PANTHER | AQUAPORIN NIP2-1 | 442 | 728 | IPR034294 | - | |
Chy07g01561 | 740 | MobiDBLite | consensus disorder prediction | 15 | 104 | - | - | |
Chy07g01561 | 740 | PANTHER | BNAA02G36290D PROTEIN | 442 | 728 | - | - | |
Chy07g01561 | 740 | ProSitePatterns | MIP family signature. | 569 | 577 | IPR022357 | - | |
Chy07g01561 | 740 | Pfam | Major intrinsic protein | 509 | 717 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy07g01561 | 740 | Pfam | Ribosomal protein L1p/L10e family | 205 | 398 | IPR028364 | - | |
Chy07g01561 | 740 | MobiDBLite | consensus disorder prediction | 84 | 98 | - | - | |
Chy07g01561 | 740 | SUPERFAMILY | Aquaporin-like | 509 | 725 | IPR023271 | - | |
Chy07g01561 | 740 | Gene3D | - | 197 | 402 | - | - | |
Chy07g01561 | 740 | CDD | Ribosomal_L1 | 197 | 402 | IPR028364 | - | |
Chy07g01561 | 740 | CDD | MIP | 512 | 717 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy07g01561 | 740 | SUPERFAMILY | Ribosomal protein L1 | 186 | 403 | IPR023674 | - | |
Chy07g01561 | 740 | MobiDBLite | consensus disorder prediction | 130 | 149 | - | - | |
Chy07g01561 | 740 | PRINTS | Major intrinsic protein family signature | 663 | 685 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy07g01561 | 740 | PRINTS | Major intrinsic protein family signature | 700 | 720 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy07g01561 | 740 | PRINTS | Major intrinsic protein family signature | 588 | 607 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy07g01561 | 740 | PRINTS | Major intrinsic protein family signature | 512 | 531 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy07g01561 | 740 | PRINTS | Major intrinsic protein family signature | 551 | 575 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy07g01561 | 740 | PRINTS | Major intrinsic protein family signature | 632 | 650 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy07g01561 | 740 | MobiDBLite | consensus disorder prediction | 28 | 63 | - | - | |
Chy07g01561 | 740 | Gene3D | Glycerol uptake facilitator protein. | 505 | 729 | IPR023271 | - | |
Chy07g01561 | 740 | Gene3D | - | 240 | 332 | IPR016095 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g01238 | Chy-Chr4:18910214 | Chy07g01561 | Chy-Chr7:19849649 | 4.33E-41 | dispersed | |
Chy06g01297 | Chy-Chr6:12116921 | Chy07g01561 | Chy-Chr7:19849649 | 3.18E-58 | dispersed | |
Chy07g01561 | Chy-Chr7:19849649 | Chy09g01365 | Chy-Chr9:15487902 | 5.43E-116 | dispersed | |
Chy07g01561 | Chy-Chr7:19849649 | Chy01g01829 | Chy-Chr1:23772559 | 2.51E-41 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g01561 | K09874 | - | csv:101207134 | 713.761 |