Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01611 ATGGCACATATTCTAATTCATGGCACCCTGCATGTCACCATCTATGAGGTCGATAAGCTTCACTCTGGTGGTCGCAATTTCTTGAAACAGTTGGTTGAAAACGTAGAGGAAGCAGTTGGGTTTGGGAGAGGAATAACGAGGCTATATGCAACCATTGATCTTGAGAAAGCCAGAGTTGGAAGAACAAGAAGGCTTGAAAGAGAACATTCTAATCCAAAATGGTACGAAACTTTCCATATCTACTGTGCTCATATGGCTTCCAACATCATCTTCACTGTCAAAGACGACAACCCAATTGGCGCAACCTTAATCGGTAGAGCCTACTTACCTGTTCGAGAGATCATCCGTGGTGATGAAGTTGACAAATGGGTTCCAATCTTAGATGAAAGCAAGAAACCCATTCGTGGGGAACCCAAAATTCACGTCAAGTTACAGTTCTTTGATGTCACTAAGGATCAAAACTGGGGTCGTGGCATCAAAAGCCCCAAGTTTCCTGGTGTTCCCTACACTTACTTCTCTCAAAGACGTGGTTGTAAGGTGACTCTGTATCAAGATGCTCACGTTCCTGATAACTTTATACCTAAAATCCCTCTTGCTGGGGGGAAGTTTTATGAGCCTCATAGATGTTGGGAAGATGTTTTTGATGCGATTATGAATGCTAAACATTTGATTTATATTTCTGGATGGTCTGTTTATACTGAGATTTCTTTGGTGAGAGATAAAAGAAGGCCAAAGCCTGGTGGAGATGTAATGCTCGGTGAATTGCTTAAGAAAAAAGCTGGGGAAGGTGTTACGGTTCTTTTGCTTATTTGGAATGATACGACTTCTGTTCCTATATTGAAGGAGGAGGGGTTAATGGCAACTCATGATGAAGATACTGCTAAGTTCTTTGCTAATACTGATGTTCATTGTGTTTTGTGTCCTCGTGATCCTGATGATGGGGCTAATGTTATTCAGGATATTGCTGTTGGGACAATGTTCACTCATCATCAGAAGATTGTTGTGGTGGATAGTGCTTTGCCTAATGGGGATCCAAGTAAAAGGAGAATTGTTAGTTTTGTTGGTGGGCTTGATCTTTGTGATGGTAGGTATGATACCCCATTTCATTCCCTTTTTAGGACTTTGGATTCTGCTCATCATGACGATTTCCATCAGCCGAATTTTGCGGGCACTTCCATTAACAAAGGTGGCCCTAGAGAGCCGTGGCACGATATCCATTCCCGCCTCGAAGGACCTGTTGCGTGGGATGTTTTGTACAATTTTGAACAGAGATGGAGGAAGCAGGGTGGGAAGGATTTGCTTTTGAAATTGAGGGATTTAGATCAGATCTTCATCACTCCATCACCTGTCACCTTCCCGGACGACTTTGATAGTTGGAATGTTCAAGTTTTCAGGTCTATCGATGGTGGGGCAGCTTTTGGTTTCCCCGACAAGCCTGAAGATGCAGCAAAAGCTGGATTGGTAAGTGGAAAGGACAACACCATTGATCGAAGTATTCAAGATGCTTACATTAATGCTATTAGAAGAGCAAAGAATTTCATATACATTGAGAATCAGTATTTCCTTGGAAGCTCATTTGAATGGAGAGGTGATGATATAAAGCCTGAGATAATTAACGCCCTGCATCTAATCCCAAAGGAACTTTCTCTTAAGATTATAAGTAAGATTGAAGCAAGAGAAAGGTTCACAGTGTACATTGTTGTTCCAATGTGGCCTGAAGGATTTCCTGAAGGGGGAACAGTTCAGGCAATATTAGATTGGCAAAGGAGGACAATGGAAATGATGTATAAAGATATAGTTCTAGCTCTCAGAGCTAATGGGATTGAAGAAGATCCTAGAAACTATCTGACATTCTTTTGTGTTGGGAATCGTGAAGTTAAAAAGCCTGGAGAATATGAACCATCAGAATCACCTGAAGAAAATTCTGATTACCTTAGAGCCCAGCAATCTAGGCGCTTCATGATTTATATTCATTCCAAGATGATGATTGTTGATGATGAATACATAATAGTGGGATCAGCCAACATCAACCAAAGATCAATGGATGGTGCAAGGGACTCAGAGATAGCAATGGGAGGTTACCAACCATATCATTTGTCAACTAGAGAGCCAGCAAGAGGCCAAATCCATGGCTTCCGTTTGGCATTGTGGTATGAACATTTAGGGTTGCTTCATCAATCCTTCCTCTTCCCAGAAAGTATTGAGTGTGTTAAAAGTGTAAACCAACTTGCTGAAAAATATTGGGATCTATACTCAAGTGAAACCTTTGATCATGACCTTCCTGGCCACTTGCTTCGCTACCCCATTGCGGTCTCCGCTGACGGTCAAGTTACCGAGCTTCCTGGGTTCCAGTTCTTCCCTGATACTAAGGCGCGAGTTCTGGGTAACAAATCTAATTATATCCCTCCAATCCTCACTACTTGA 2424 41.96 MAHILIHGTLHVTIYEVDKLHSGGRNFLKQLVENVEEAVGFGRGITRLYATIDLEKARVGRTRRLEREHSNPKWYETFHIYCAHMASNIIFTVKDDNPIGATLIGRAYLPVREIIRGDEVDKWVPILDESKKPIRGEPKIHVKLQFFDVTKDQNWGRGIKSPKFPGVPYTYFSQRRGCKVTLYQDAHVPDNFIPKIPLAGGKFYEPHRCWEDVFDAIMNAKHLIYISGWSVYTEISLVRDKRRPKPGGDVMLGELLKKKAGEGVTVLLLIWNDTTSVPILKEEGLMATHDEDTAKFFANTDVHCVLCPRDPDDGANVIQDIAVGTMFTHHQKIVVVDSALPNGDPSKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDSAHHDDFHQPNFAGTSINKGGPREPWHDIHSRLEGPVAWDVLYNFEQRWRKQGGKDLLLKLRDLDQIFITPSPVTFPDDFDSWNVQVFRSIDGGAAFGFPDKPEDAAKAGLVSGKDNTIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFEWRGDDIKPEIINALHLIPKELSLKIISKIEARERFTVYIVVPMWPEGFPEGGTVQAILDWQRRTMEMMYKDIVLALRANGIEEDPRNYLTFFCVGNREVKKPGEYEPSESPEENSDYLRAQQSRRFMIYIHSKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGGYQPYHLSTREPARGQIHGFRLALWYEHLGLLHQSFLFPESIECVKSVNQLAEKYWDLYSSETFDHDLPGHLLRYPIAVSADGQVTELPGFQFFPDTKARVLGNKSNYIPPILTT* 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20229345 20232652 - Chy7G144410.1 Chy07g01611 231622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01611 807 Pfam C2 domain 8 126 IPR000008 -
Chy07g01611 807 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Chy07g01611 807 PIRSF PLD_plant 1 807 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Chy07g01611 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Chy07g01611 807 SUPERFAMILY Phospholipase D/nuclease 487 737 - -
Chy07g01611 807 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Chy07g01611 807 SMART C2_3c 9 123 IPR000008 -
Chy07g01611 807 Gene3D Endonuclease Chain A 473 696 - -
Chy07g01611 807 CDD C2_plant_PLD 2 147 - -
Chy07g01611 807 Gene3D C2 domain 5 156 IPR035892 -
Chy07g01611 807 SUPERFAMILY Phospholipase D/nuclease 150 435 - -
Chy07g01611 807 Gene3D Endonuclease Chain A 200 440 - -
Chy07g01611 807 PANTHER PHOSPHOLIPASE D 2 807 IPR015679 -
Chy07g01611 807 PANTHER PHOSPHOLIPASE D 2 807 - -
Chy07g01611 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Chy07g01611 807 SMART pld_4 653 680 IPR001736 GO:0003824
Chy07g01611 807 SMART pld_4 325 363 IPR001736 GO:0003824
Chy07g01611 807 Pfam PLD-like domain 504 688 IPR025202 -
Chy07g01611 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Chy07g01611 807 Pfam Phospholipase D C terminal 726 797 IPR024632 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00644 Chy-Chr4:7373189 Chy07g01611 Chy-Chr7:20229345 0 dispersed
Chy07g01611 Chy-Chr7:20229345 Chy11g02001 Chy-Chr11:25893372 0 dispersed
Chy01g02000 Chy-Chr1:24975703 Chy07g01611 Chy-Chr7:20229345 0 wgd
Chy03g01122 Chy-Chr3:14515013 Chy07g01611 Chy-Chr7:20229345 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01611 K01115 - csv:101215246 1639.01