Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy07g01715 | ATGGAAGGTGCCATTTCAGAAAGAGAATGGATATCTCTTAGTGGAGCTTATACTGCTGAAGAATCTGATTTTATGGCTAATTTACTCAGCAATTATTGTATTCCTAATGAGTTAAATTCAGATTTAAGCTTGGAAATTCCATCTTCTTATTGGGCTTCTTCTAATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATCTATGCCCTTTCACAACCCAATAACAATCTTCCTTATACTTTCAATGACTCTAACCCCACTCTTTGGTTGCCTAATAATGGTGCTTCCTTGTCCTTGGATTTTTCCATCGTGGATGTCAGGAATGCCGATTGCTTGGACGATAACGGTTCGAATATTAGTAAAACAAGGCAATGCAGCAGGTTGCAACAATCCCCTGCTGACTCTGTTGTCAATGGGAAGAGATCACAACCAAAACGAAGAGCCGATGATGTGATGGTGGAAGAAGCTATGAGGGATGATAAAGTTGGACCGGTTTCAGTTGAGAATTTCTCGAGGAAGAGACCTCAAAGTTTGCTTGATGTTGAAAAGACAAAAAGGAGCGGGAGGGCACGGAAGACATCGAAGATTGCTTCAGGTAGCTGCAATGAAGAGGATCAAATTGTTAGTCCAAATGGGCAATGCACAAGCAGTTTCAGCTCTGAAGATGATTGTAATGAGGCTCAAGAAAACAATGGTGGAATCCATTCTAGCTCAACCTCAAATGGAAAGTCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAAAGCCTCGTCCCAAATGGTACAAAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTCCAATACGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGCTCGGATGATTTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGTTGATGAAGCAAGACAATGCATCACAATAG | 1026 | 40.55 | MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIVDVRNADCLDDNGSNISKTRQCSRLQQSPADSVVNGKRSQPKRRADDVMVEEAMRDDKVGPVSVENFSRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGIHSSSTSNGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ* | 342 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 20896769 | 20898250 | + | Chy7G145450.1 | Chy07g01715 | 231726 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy07g01715 | 341 | CDD | bHLH_AtIND_like | 254 | 316 | - | - | |
Chy07g01715 | 341 | MobiDBLite | consensus disorder prediction | 196 | 257 | - | - | |
Chy07g01715 | 341 | MobiDBLite | consensus disorder prediction | 126 | 264 | - | - | |
Chy07g01715 | 341 | MobiDBLite | consensus disorder prediction | 126 | 141 | - | - | |
Chy07g01715 | 341 | Gene3D | - | 255 | 311 | IPR036638 | GO:0046983 | |
Chy07g01715 | 341 | PANTHER | TRANSCRIPTION FACTOR BHLH84-LIKE | 2 | 338 | - | - | |
Chy07g01715 | 341 | Pfam | Helix-loop-helix DNA-binding domain | 263 | 303 | IPR011598 | GO:0046983 | |
Chy07g01715 | 341 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 253 | 302 | IPR011598 | GO:0046983 | |
Chy07g01715 | 341 | MobiDBLite | consensus disorder prediction | 143 | 170 | - | - | |
Chy07g01715 | 341 | SMART | finulus | 259 | 308 | IPR011598 | GO:0046983 | |
Chy07g01715 | 341 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 253 | 318 | IPR036638 | GO:0046983 | |
Chy07g01715 | 341 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 2 | 338 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy07g01715 | Chy-Chr7:20896769 | Chy09g00499 | Chy-Chr9:4851121 | 3.48E-25 | dispersed | |
Chy01g00128 | Chy-Chr1:848554 | Chy07g01715 | Chy-Chr7:20896769 | 1.06E-62 | wgd | |
Chy03g01587 | Chy-Chr3:17898667 | Chy07g01715 | Chy-Chr7:20896769 | 1.58E-55 | wgd | |
Chy07g00184 | Chy-Chr7:1509735 | Chy07g01715 | Chy-Chr7:20896769 | 4.95E-55 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18380 | PF00010 | HLH | 7.10E-09 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy07g01715 | - | - | csv:101217468 | 645.58 |