Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01715 ATGGAAGGTGCCATTTCAGAAAGAGAATGGATATCTCTTAGTGGAGCTTATACTGCTGAAGAATCTGATTTTATGGCTAATTTACTCAGCAATTATTGTATTCCTAATGAGTTAAATTCAGATTTAAGCTTGGAAATTCCATCTTCTTATTGGGCTTCTTCTAATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATCTATGCCCTTTCACAACCCAATAACAATCTTCCTTATACTTTCAATGACTCTAACCCCACTCTTTGGTTGCCTAATAATGGTGCTTCCTTGTCCTTGGATTTTTCCATCGTGGATGTCAGGAATGCCGATTGCTTGGACGATAACGGTTCGAATATTAGTAAAACAAGGCAATGCAGCAGGTTGCAACAATCCCCTGCTGACTCTGTTGTCAATGGGAAGAGATCACAACCAAAACGAAGAGCCGATGATGTGATGGTGGAAGAAGCTATGAGGGATGATAAAGTTGGACCGGTTTCAGTTGAGAATTTCTCGAGGAAGAGACCTCAAAGTTTGCTTGATGTTGAAAAGACAAAAAGGAGCGGGAGGGCACGGAAGACATCGAAGATTGCTTCAGGTAGCTGCAATGAAGAGGATCAAATTGTTAGTCCAAATGGGCAATGCACAAGCAGTTTCAGCTCTGAAGATGATTGTAATGAGGCTCAAGAAAACAATGGTGGAATCCATTCTAGCTCAACCTCAAATGGAAAGTCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAAAGCCTCGTCCCAAATGGTACAAAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTCCAATACGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGCTCGGATGATTTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGTTGATGAAGCAAGACAATGCATCACAATAG 1026 40.55 MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIVDVRNADCLDDNGSNISKTRQCSRLQQSPADSVVNGKRSQPKRRADDVMVEEAMRDDKVGPVSVENFSRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGIHSSSTSNGKSRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ* 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20896769 20898250 + Chy7G145450.1 Chy07g01715 231726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01715 341 CDD bHLH_AtIND_like 254 316 - -
Chy07g01715 341 MobiDBLite consensus disorder prediction 196 257 - -
Chy07g01715 341 MobiDBLite consensus disorder prediction 126 264 - -
Chy07g01715 341 MobiDBLite consensus disorder prediction 126 141 - -
Chy07g01715 341 Gene3D - 255 311 IPR036638 GO:0046983
Chy07g01715 341 PANTHER TRANSCRIPTION FACTOR BHLH84-LIKE 2 338 - -
Chy07g01715 341 Pfam Helix-loop-helix DNA-binding domain 263 303 IPR011598 GO:0046983
Chy07g01715 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 253 302 IPR011598 GO:0046983
Chy07g01715 341 MobiDBLite consensus disorder prediction 143 170 - -
Chy07g01715 341 SMART finulus 259 308 IPR011598 GO:0046983
Chy07g01715 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 253 318 IPR036638 GO:0046983
Chy07g01715 341 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 2 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01715 Chy-Chr7:20896769 Chy09g00499 Chy-Chr9:4851121 3.48E-25 dispersed
Chy01g00128 Chy-Chr1:848554 Chy07g01715 Chy-Chr7:20896769 1.06E-62 wgd
Chy03g01587 Chy-Chr3:17898667 Chy07g01715 Chy-Chr7:20896769 1.58E-55 wgd
Chy07g00184 Chy-Chr7:1509735 Chy07g01715 Chy-Chr7:20896769 4.95E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18380 PF00010 HLH 7.10E-09 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01715 - - csv:101217468 645.58