Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy07g01733 ATGCCCCGCCTCGACTACCTCCGCCGCTGCCGTGACCACTCCATCGACCTCACTGCCCGTCAAGACTCCATCAACTGGATCTTGAAGGTTCACTCCCACTACAATTTCAAACCGGTGACTGCGATTCTCTCCGTTAATTACTTTGATCGCTTCCTCTCCTCCAATATTCTTCCACGGCGAAATGGATGGGCGTTTCAGCTTCTATCGGTGGCGTGTTTGTCATTAGCGGCGAAAATGGAAGAACCTGAGGTTCCGTTGCTTTTGGACCTTCAAATCTTTGAACCTAAGTACGTATTCGAGCCAAAAACCGTTCAGAGAATGGAGCTTTGGGTTATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTTCTCCACCACTTCATCTCCGATCTTCCTTCGTCTTCTTCTGCCGCTGACGGCGATGATTCTCATCGCTTATTCTCATCTTCTTCCGATCTCATTCTCAGCACCATACGCGTGATCGATTTCTTGGAGTTTCCGCCGTCCACCATTGCTGCCGCCGCCGTTCTCTGTGCCGCTGGTGAACGGTTGGATTCTCCGGCGGGTTGTTCCCATTTTCTTGCGGCGAACAGAATCGAAAATGTGAAAAGCTGTCAACAACTAATGGAGGAGTACGTGATTGACACGTGTACAGCAGAGCTCCGAAAACAGCGGAGGATAGGAGAAGAGCAGCCGGCTCCACCGAGTCCAGTCGGGGTTCTCGACGCGGCTGCTTGCGCTAGCTGTGACAATCCTGGCTCCACCAGCCACGAGCCGCCCTCTAAGAGGAGACGCTCCTCTGCCCCCGATGTACAGCACCAGTAG 837 52.69 MPRLDYLRRCRDHSIDLTARQDSINWILKVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGDDSHRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERLDSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEQPAPPSPVGVLDAAACASCDNPGSTSHEPPSKRRRSSAPDVQHQ* 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21018011 21019908 + Chy7G145630.1 Chy07g01733 231744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy07g01733 278 Gene3D - 3 120 - -
Chy07g01733 278 SMART Cyclin_C_2 122 254 IPR004367 -
Chy07g01733 278 Pfam Cyclin, N-terminal domain 2 119 IPR006671 -
Chy07g01733 278 Pfam Cyclin, C-terminal domain 122 227 IPR004367 -
Chy07g01733 278 MobiDBLite consensus disorder prediction 250 278 - -
Chy07g01733 278 SMART cyclin_7 25 113 IPR013763 -
Chy07g01733 278 PANTHER CYCLINS 4 261 IPR039361 -
Chy07g01733 278 SUPERFAMILY Cyclin-like 104 218 IPR036915 -
Chy07g01733 278 SUPERFAMILY Cyclin-like 2 119 IPR036915 -
Chy07g01733 278 CDD CYCLIN 20 109 IPR013763 -
Chy07g01733 278 MobiDBLite consensus disorder prediction 261 278 - -
Chy07g01733 278 PANTHER CYCLIN-D2-1-LIKE 4 261 - -
Chy07g01733 278 Gene3D - 1 211 - -
Chy07g01733 278 ProSitePatterns Cyclins signature. 20 51 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01325 Chy-Chr3:16250589 Chy07g01733 Chy-Chr7:21018011 8.61E-59 dispersed
Chy07g01733 Chy-Chr7:21018011 Chy10g00930 Chy-Chr10:14929061 1.85E-59 dispersed
Chy07g01733 Chy-Chr7:21018011 Chy02g00746 Chy-Chr2:4612117 7.99E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy07g01733 K18810 - csv:101219121 533.487