Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00173 ATGCCCCTATTTCCCTCCTTCTTCTTTCTCACTACCTTCTCCTTCTTCCTTTCTTTCACTTCCTCTCTCAACTCCGATGGCCTCTCCCTCCTCGCCCTCAAAGCCGCCATTGAATCCGACCCATCTCACGTTCTCGAGTCCTGGTCCGAGTTTGATTCCACCCCATGTCACTGGCCCGGAATCGTCTGCACTCGCGACCGAGTCACTCAGCTCTCTCTCCCCAACAAAGGTCTCACTGGCTACATTCCTTCTGAACTCGGCCTCCTCGATTCCCTCCGTCGTCTCTCCCTCGCCTTCAACAATTTCTCTAAACCCATTCCTTCTCATCTCTACAACGCTACAAATCTCGTCGTTCTAGACCTTTCCCACAATGCTCTCTCTGGCTCGCTTTCCGATCAAATCGGCGATCTGAGGAAGCTTCGCCATCTCGATTTATCCTCAAATGCTCTCAATGGTTCTCTTCCTAATCGACTTACTGACCTAACCGAACTCGTCGGAACTCTCAATTTGTCCTACAATCGATTCTCCGGCGAGGTTCCCCCTTCCTTCGGAAACCTCCCGCTGATCGTGAATCTCGACGTCCGTCACAACAATCTCACCGGAAAAATCCCTCAGGTGGGTTCGCTGTTGAATCAAGGTCCGACGGCATTCTCCGGCAACCCGAGTCTATGTGGGTTTCCGTTACAAACAACATGTCCAGAAGCTCAGAACCCGAACATCTTTCCAGAGAACCCGCAGAATCCCAAGTCGCTAAACGGCAACTTCCAGGGCTACGGTAGCGGGAGAGAGAGTGGTGGCGGTGGCGTGGCGGGGTCAGCGACTGTGGCCGTGGTATCTTCAATAATCGCATTGGTGGGGGCGGTATCAGTGACGGTGTGGTGGTTCCGGAGGAAGACGGCAGTGGGGAGGCCAGAGGAGGGCAAAACGGGAAAAGGGAGTCCGGAAGGGGAAAGTTGCGGGGATTTGGAAGGGCAAGATGGTAAATTCGTGGTGATGGATGAAGGGATGAATTTGGAATTAGAGGATTTGTTAAGGGCATCGGCATACGTGGTGGGGAAGACTAGGAGTGGGATAGTGTATAAGGTAGTGGCGGGGAGGGGATCCAGTGTGGGCGCGAGTATTGTAGCTGTAAGGAGACTTAACGATAGCGATGCCACGTTGACGTTTAAGGATTTTGAGAATGAGATCGAGTCCATCGGTAGGATCAACCATCCCAACATCGTACGGTTGAGAGCTTATTACTATGCAAGTGATGAGAAATTGCTGGTCTCTGATTTTATTAAAAATGGAAGCTTGCAAGCTGCCCTACACGGAAGTCCATCTAGTTCTTTGTTACCTTTGCCTTGGGCTGCAAGGTTAAAAATTGCTCAAGGAGCTGCAAGGGGTTTGGCATACATTCATGAATTTGGTGCTCGGAAATACATACATGGAAACATTAAATCAACAAAAATTCTTCTTGACGATGATTTTGAGCCTTACATTTCAGGTTTTGGACTTGGTCGTCTTGGCCAAGGAGTACCTAAGTTCACTGCAACTTCGTCCAAGAAGTTGAGCTCAAACCAAAATATGATAAGCTCAATCATGGGAACAAGCATTTCAACTCCCTCTCCGATGTATTTGGCACCCGAGGTTCGGGAGTTTGGAGGGAAGTACACGCAGAAGTGTGACGTGTACTCGTTTGGCATTGTGCTTTTAGAACTTTTGAGTGGTAGATTGCCAGATGTAGGATCGGAAAATGATGGGAAGGGGTTGGAATGTTTCGTGAGAAAAGCGTTTCAAGAAGAACGCCCCTTGACTGAGGTTATAGACCAGGCGCTTGTGCCAGAGATTTATGCAAAGAAACAAGTGGTTTCGATGTTTCACATTGCACTGAATTGCACAGAACTTGATCCCGAGCTACGTCCGAGAATGAGAACGATATCAGAGAGTCTCGATCGAGTTAAATCTCAATGA 1953 49.1 MPLFPSFFFLTTFSFFLSFTSSLNSDGLSLLALKAAIESDPSHVLESWSEFDSTPCHWPGIVCTRDRVTQLSLPNKGLTGYIPSELGLLDSLRRLSLAFNNFSKPIPSHLYNATNLVVLDLSHNALSGSLSDQIGDLRKLRHLDLSSNALNGSLPNRLTDLTELVGTLNLSYNRFSGEVPPSFGNLPLIVNLDVRHNNLTGKIPQVGSLLNQGPTAFSGNPSLCGFPLQTTCPEAQNPNIFPENPQNPKSLNGNFQGYGSGRESGGGGVAGSATVAVVSSIIALVGAVSVTVWWFRRKTAVGRPEEGKTGKGSPEGESCGDLEGQDGKFVVMDEGMNLELEDLLRASAYVVGKTRSGIVYKVVAGRGSSVGASIVAVRRLNDSDATLTFKDFENEIESIGRINHPNIVRLRAYYYASDEKLLVSDFIKNGSLQAALHGSPSSSLLPLPWAARLKIAQGAARGLAYIHEFGARKYIHGNIKSTKILLDDDFEPYISGFGLGRLGQGVPKFTATSSKKLSSNQNMISSIMGTSISTPSPMYLAPEVREFGGKYTQKCDVYSFGIVLLELLSGRLPDVGSENDGKGLECFVRKAFQEERPLTEVIDQALVPEIYAKKQVVSMFHIALNCTELDPELRPRMRTISESLDRVKSQ* 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3915067 3920014 - Chy8G147780.1 Chy08g00173 231959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00173 650 Gene3D Ribonuclease Inhibitor 23 166 IPR032675 -
Chy08g00173 650 SUPERFAMILY L domain-like 25 229 - -
Chy08g00173 650 SUPERFAMILY Protein kinase-like (PK-like) 350 643 IPR011009 -
Chy08g00173 650 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Chy08g00173 650 Gene3D Ribonuclease Inhibitor 167 234 IPR032675 -
Chy08g00173 650 MobiDBLite consensus disorder prediction 303 322 - -
Chy08g00173 650 Pfam Protein kinase domain 351 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00173 650 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Chy08g00173 650 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 13 650 - -
Chy08g00173 650 Gene3D Phosphorylase Kinase; domain 1 328 426 - -
Chy08g00173 650 PRINTS Leucine-rich repeat signature 137 150 - -
Chy08g00173 650 PRINTS Leucine-rich repeat signature 116 129 - -
Chy08g00173 650 Gene3D Transferase(Phosphotransferase) domain 1 427 650 - -
Chy08g00173 650 Coils Coil 644 650 - -
Chy08g00173 650 ProSiteProfiles Protein kinase domain profile. 345 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00173 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 650 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00173 Chy-Chr8:3915067 Chy10g00792 Chy-Chr10:13971417 1.00E-168 dispersed
Chy08g00173 Chy-Chr8:3915067 Chy10g01174 Chy-Chr10:16557729 1.05E-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71413 PF00069 Pkinase 9.70E-26 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00173 - - csv:101212426 1174.46