Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00182 ATGGCCTTAGCCATGGTGATTGTTGCTCTGTTTTTGCTCCTCTGTTTTTGCGCTGCTCTCCGACGGAATGAAGTTCGATACAGAAAAAATGGGTTGCCTCCTGGTACAATGGGTTGGCCTGTTTTTGGTGAAACCTCTGAGTTTCTTAAACAAGGTCCGAATTTTATGAATTCTAAAAGAGCAAGGTATGGGAGCTTTTTTAAATCACATATTTTGGGATCTCCTACGGTTGTTTCTATGGATCCAGAGGTTAATAGATATATTTTAATGAATGAATCTAAAGGACTCGTCGCTGGTTATCCTCAATCTATGCTTGATATACTTGGAAAATGCAATATCGCTGCCGTACACGGCGACGCTCATAAGCTTATGAGAGGTGCTCTACTTGCTATTGTTAGTCCCACCATGATTAAAGATCGTCTTCTTCTTCAAGTTGATGAGTTTATGAGATCCCATTTGCGTAATTGGGATAGCCAAATCATTGATATTCAAAAAAAAACTAAACAGATGGCTTTCTGGACATCTTTGAAGCAGACTACCAGTATCGAATCCGGTCCATTATGGGAATCTTTCACCATAGAATTCTTTAAGCTCGTCCTGGGCACTTTCTCGCTCCCAATCGATCTTCCAGGCACGAATTACCGTATAGGAGTTCAGGCAAGGAATAACATAGTAAAGCTATTGAAGCAGCTGATTAATGAGAGAGTAAATTCAAAGATTCAAATAGATGACATGCTTGGATATTTATTGAGTGAAGAGAACAAATATAAATTAAATGAGGAACAGATTATTGATCAAATCATTACTGTTTTCTATTCTGGTTATGAAACTGTTTCAACAACTTCAATGATGGCTGTAAAGTTCCTTCATGATCATCCCAAAGTTCTTCAGCAACTCAGAGAAGAACATTTAGCAATAAGTGAGAAGAAAAATCCTGAGGACCCGATTGATTGGGATGATTTTAAAGCAATGGAGTTCACTCGTGCGGTGATTTTTGAAACATCAAGGCTAGCTACTGTTGTTAATGGAGTTTTGAGGAAAACTACAAAGGATTTGGAATTAAATGGGTTTCTAATTCCTAAAGGATGGAGGATTTATGTGTATACTCGAGAGATAAACTATGACCCTTTTCTCTATTCCGAACCATTCACTTTCAACCCTTGGAGATGGCTGGACAAAAACTTAGAGTCCCATAATTATTTTTTCCTCTTTGGCGGTGGAACTAGGCTTTGTCCTGGCAAAGAATTGGGAATTGCAGAGGTTTCTACTTTTTTACATTACTTTGTAACTAAATACAGGTGGGAAGAAGTTGGAGAATGTACGCTCTTGAAATTTCCAAGAGTGAAAGCTCGAAATGGGTTTCACATTAGGAAAACGAAGAGAGATGTTATTGCGAGGTCAAAGCATATCAGATTCATGAATATATCATCGAAATTTGAGAAAAAACGTGCCTCATATATACTGGAGGGTAATCCGGACCAGACCAGACCGAAGGCCATTTCCTTGACTAGGGACAAGGTAGACCTGGGCCACTCAAGCAACAAAACCTGCTCTGATCGGGGTTATAATTTGACTGAAAAGGTGACCTGGCCACGACATCAACCAAAGAGAGTTCCCTGA 1620 39.32 MALAMVIVALFLLLCFCAALRRNEVRYRKNGLPPGTMGWPVFGETSEFLKQGPNFMNSKRARYGSFFKSHILGSPTVVSMDPEVNRYILMNESKGLVAGYPQSMLDILGKCNIAAVHGDAHKLMRGALLAIVSPTMIKDRLLLQVDEFMRSHLRNWDSQIIDIQKKTKQMAFWTSLKQTTSIESGPLWESFTIEFFKLVLGTFSLPIDLPGTNYRIGVQARNNIVKLLKQLINERVNSKIQIDDMLGYLLSEENKYKLNEEQIIDQIITVFYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAISEKKNPEDPIDWDDFKAMEFTRAVIFETSRLATVVNGVLRKTTKDLELNGFLIPKGWRIYVYTREINYDPFLYSEPFTFNPWRWLDKNLESHNYFFLFGGGTRLCPGKELGIAEVSTFLHYFVTKYRWEEVGECTLLKFPRVKARNGFHIRKTKRDVIARSKHIRFMNISSKFEKKRASYILEGNPDQTRPKAISLTRDKVDLGHSSNKTCSDRGYNLTEKVTWPRHQPKRVP* 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4204469 4214853 + Chy8G147870.1 Chy08g00182 231968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00182 539 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 Pfam Cytochrome P450 33 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Chy08g00182 539 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 SUPERFAMILY Cytochrome P450 26 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 Gene3D Cytochrome P450 22 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00182 539 PANTHER CYTOCHROME P450 26 6 457 - -
Chy08g00182 539 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00182 Chy-Chr8:4204469 Chy09g00186 Chy-Chr9:1588409 0 dispersed
Chy08g00182 Chy-Chr8:4204469 Chy01g02211 Chy-Chr1:26589152 1.80E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00182 K09590 - csv:101204494 884.019