Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00202 ATGGACTTCTTACAGTCTTTGGATCCTCAAATCCTTCTGGGTGTCGCTGTGGCTGTTTTAGCCCTTGCCGTTGGTGCTCTCTATGTATTATCCTCCTCCAAAAAAAGCAAATCTAGAGGTTGCTTGGATCCAGAAATTTTCAAGGAGTTTAAACTTATCAAGCGACTGCAACTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCTAGTCCTATTTCAGTTCTAGGTCTTCCCATTGGACAACATATAAGTTGCAGGGGAAAGGATGGCCAAGGTGAAGAGGTTATCAAACCGTACACACCTATTACTTTGGATTCTGATCTTGGATATTTTGAATTGGTCATAAAGATGTATCCCCAAGGAAGGATGTCACACCATTTCCGACAAATGCGTGTAGGAGATTTTCTTGCTGTAAAGGGTCCCAAGGGACGTTTCAGATATCAACCTGGCCAGGTCAGAGCATTTGGTATGCTTGCTGGCGGCTCTGGCATTACTCCTATGTATCAAGTTGCTCGGGCAATTTTAGAAAATCCAAACGACAAGACAAAGGTACATCTCATTTATGCCAACGTCACCTATGAGGACATTCTCTTAAAGGAGGAGTTGGACCTTCTTGCCAAAAGCTACCCAGATAGCTTCAAGCTCTACTATGTCTTAAACCAGCCTCCTGAAGCGTGGGATGGCGGCGTTGGATTTGTATCGAAGGAGATGATTCAAACCCACTGCCCTGCTCCTGCTTCTGATATTCGGATTTTAAGATGTGGGCCACCACCAATGAACAAGGCCATGGCTGCTCATCTTGAAGAACTTGGATATGCACCTGAGATGCTGTTCATGTTCTGA 846 44.56 MDFLQSLDPQILLGVAVAVLALAVGALYVLSSSKKSKSRGCLDPEIFKEFKLIKRLQLSHNVAKFTFTLPSPISVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDLGYFELVIKMYPQGRMSHHFRQMRVGDFLAVKGPKGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKEELDLLAKSYPDSFKLYYVLNQPPEAWDGGVGFVSKEMIQTHCPAPASDIRILRCGPPPMNKAMAAHLEELGYAPEMLFMF* 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4773222 4778678 + Chy8G148070.1 Chy08g00202 231988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00202 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Chy08g00202 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 - -
Chy08g00202 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Chy08g00202 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Chy08g00202 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Chy08g00202 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Chy08g00202 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Chy08g00202 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Chy08g00202 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Chy08g00202 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 278 IPR039261 -
Chy08g00202 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
Chy08g00202 281 CDD cyt_b5_reduct_like 50 281 - -
Chy08g00202 281 Gene3D Translation factors 40 139 - -
Chy08g00202 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 IPR001834 GO:0016491
Chy08g00202 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Chy08g00202 281 Gene3D - 140 281 IPR039261 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01700 Chy08g00202 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01700 Chy-Chr4:23423112 Chy08g00202 Chy-Chr8:4773222 8.47E-159 dispersed
Chy05g00027 Chy-Chr5:194281 Chy08g00202 Chy-Chr8:4773222 2.11E-145 dispersed
Chy05g01329 Chy-Chr5:17420511 Chy08g00202 Chy-Chr8:4773222 5.46E-67 dispersed
Chy08g00202 Chy-Chr8:4773222 Chy09g00574 Chy-Chr9:6394712 5.85E-42 dispersed
Chy08g00202 Chy-Chr8:4773222 Chy07g00682 Chy-Chr7:6605252 1.19E-48 transposed
Chy08g00202 Chy-Chr8:4773222 Chy09g00573 Chy-Chr9:6376130 7.12E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00202 K00326 - csv:101212569 518.85