Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy08g00289 | ATGGGATCTTCTGTTGCTGCAATGGGCATGGTTCCCGACTCCAAATTCCATGTTCTTGCTGTTGATGATAGCGTTATTGATAGGAAATTGATTGAAAAACTCCTTAAAACCTCCTCTTACCAAGTCACTACGGTTGATTCTGGGAGTAAAGCTTTGGAGTTTTTGGGTTATGACCCTGGAAATAGCTCGATTCCTTCTGTTTCATCTAACCATCACCATCACCATCAGGAAGTGGATGTGAATCTTGTAATTACTGATTACTGTATGCCTGAAATGACTGGCTATGATTTGTTGAAGAAGATCAAGGGGTCTACAGCTCTGAGAAACATACCTGTTGTGATTATGTCATCTGAGAATGTGCCTGCTAGAATCAATAGGGTGGATTTGATGATTGGAAACAGATGCTTAGAAGAAGGAGCAGAAGAATTCTTCTTGAAACCGGTCCAACTTTCGGATGTCAACAGGCTTAGACCCCACATGTTGAAAACCAAACTCAAATGTGACAAACCAGAAAGAACAACAGAAGACCACCCTGATTCAAGCCAATCTCAAGCACTAGAACAACAACAACAACGTGAACAAGAACAATCACGACCGCTACTGCAGCAGATCCCAACATCGCTGCAAGATCAAGATCAGATACAATCTGTACCACTTCTGCCAACACCACTACAGGAGCAAGAACAGTTGCAATTACTCCCTCCAACACCGCCTCAACAATCAAACAACAACAAAAGGAAGGCAATGGAAGATGGACTTTCTCCAGATAGAACAAGGCCTAGATACAATGGTATTACCACCATGGTGTAG | 810 | 42.47 | MGSSVAAMGMVPDSKFHVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSVSSNHHHHHQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRVDLMIGNRCLEEGAEEFFLKPVQLSDVNRLRPHMLKTKLKCDKPERTTEDHPDSSQSQALEQQQQREQEQSRPLLQQIPTSLQDQDQIQSVPLLPTPLQEQEQLQLLPPTPPQQSNNNKRKAMEDGLSPDRTRPRYNGITTMV* | 270 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6751093 | 6752545 | + | Chy8G148940.1 | Chy08g00289 | 232075 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy08g00289 | 269 | SUPERFAMILY | CheY-like | 14 | 162 | IPR011006 | - | |
Chy08g00289 | 269 | ProSiteProfiles | Response regulatory domain profile. | 17 | 161 | IPR001789 | GO:0000160 | |
Chy08g00289 | 269 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE | 12 | 267 | - | - | |
Chy08g00289 | 269 | MobiDBLite | consensus disorder prediction | 225 | 248 | - | - | |
Chy08g00289 | 269 | SMART | REC_2 | 16 | 157 | IPR001789 | GO:0000160 | |
Chy08g00289 | 269 | Pfam | Response regulator receiver domain | 18 | 152 | IPR001789 | GO:0000160 | |
Chy08g00289 | 269 | Gene3D | - | 17 | 253 | - | - | |
Chy08g00289 | 269 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 12 | 267 | IPR045279 | GO:0009736 | |
Chy08g00289 | 269 | MobiDBLite | consensus disorder prediction | 179 | 198 | - | - | |
Chy08g00289 | 269 | MobiDBLite | consensus disorder prediction | 225 | 269 | - | - | |
Chy08g00289 | 269 | MobiDBLite | consensus disorder prediction | 165 | 198 | - | - | |
Chy08g00289 | 269 | CDD | REC_typeA_ARR | 18 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02547 | Chy-Chr2:28742346 | Chy08g00289 | Chy-Chr8:6751093 | 8.29E-44 | dispersed | |
Chy03g00788 | Chy-Chr3:10786315 | Chy08g00289 | Chy-Chr8:6751093 | 5.80E-55 | dispersed | |
Chy08g00289 | Chy-Chr8:6751093 | Chy10g01363 | Chy-Chr10:17856425 | 6.92E-66 | dispersed | |
Chy08g00289 | Chy-Chr8:6751093 | Chy10g00941 | Chy-Chr10:14996171 | 1.56E-49 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18392 | PF00072 | Response_reg | 8.30E-15 | CL0304 | Chy | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy08g00289 | K14492 | - | csv:101220999 | 443.351 |