Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00310 ATGTCAAAATGGATGAGTTTAGTAAGCATCATGTTGTTGGTGGGAGTGAGTTTAAGGTTTAGAAGTGTAAATGGGTTGAATATCGGATATTACTTGATGAGTTGTCCCTTTGTTGATCCTATTGTTAGGAACACGGTCAACAGAGCCCTTCAAAATGATCCCACTCTGGCTGCTTCTCTTATTCGAATGCATTTTCATGATTGTTTCGTTGAGGGATGCGATGGGTCAATATTGATTGATTCAACAAGAGACAACACAGCAGAAAAAGACTCTCCTGCTAACCTTAGCTTACGAGGCTATGAGGTTATTGATGAGATTAAGGAGCAACTTGAACGCCAATGTCCTGGTGTTGTTTCTTGTGCTGACGTCATCGCTATGGCAGCCAGAGATGCAGTCTTTTGGGCAGGGGGTCCATTTTACGAGATACCGAAAGGAAGGAAGGACGGAAGCAGATCAAGAATCGAAGACACTGTTAATTTACCTTCTCCTTTCTTAAATGCTTCTCAGCTATTGAATGCTTTTGCTCAACGTGGCTTTACTCCTCAACAAATGGTTGCACTTTCCGGAGCACATACATTGGGAGTGGCAAGATGCATATCATTCAAAGGGAGACTTGACGGCAACGACCCTCTACTAAGTCCAAACTTTGGAAGAGCATTGTCAAGAACATGCAGCAATGGAGACAACGCGCTACAAACATTTGATGCCACACCCGACAGCTTCGACAACGTCTATTACAATGCGGTGTTAAGAGGCGCTGGAGTTTTGTTTTCGGACCAGACATTGTTCGCTAGCCCTCGTACGAGAGGCATTGTCACAGCCTATGCCATGAACCAAGCCCTGTTCTTCTTGGACTTTCAACAAGCCATCATAAAAATGGGGTTACTTGATGTGAAGGAAGGTTATAGAGGCCAAGTTCGTCGCAACTGCCGTAGAGTTAATTAA 945 44.02 MSKWMSLVSIMLLVGVSLRFRSVNGLNIGYYLMSCPFVDPIVRNTVNRALQNDPTLAASLIRMHFHDCFVEGCDGSILIDSTRDNTAEKDSPANLSLRGYEVIDEIKEQLERQCPGVVSCADVIAMAARDAVFWAGGPFYEIPKGRKDGSRSRIEDTVNLPSPFLNASQLLNAFAQRGFTPQQMVALSGAHTLGVARCISFKGRLDGNDPLLSPNFGRALSRTCSNGDNALQTFDATPDSFDNVYYNAVLRGAGVLFSDQTLFASPRTRGIVTAYAMNQALFFLDFQQAIIKMGLLDVKEGYRGQVRRNCRRVN* 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7301002 7303018 + Chy8G149150.1 Chy08g00310 232096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00310 314 Gene3D - 30 314 - -
Chy08g00310 314 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 CDD secretory_peroxidase 25 313 IPR033905 GO:0004601|GO:0042744
Chy08g00310 314 SUPERFAMILY Heme-dependent peroxidases 25 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 Gene3D Peroxidase, domain 2 161 293 - -
Chy08g00310 314 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Chy08g00310 314 Pfam Peroxidase 42 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PANTHER PEROXIDASE 47 14 312 - -
Chy08g00310 314 ProSiteProfiles Plant heme peroxidase family profile. 25 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy08g00310 314 PANTHER PEROXIDASE 25-RELATED 14 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00900 Chy-Chr6:6580789 Chy08g00310 Chy-Chr8:7301002 1.14E-96 dispersed
Chy08g00310 Chy-Chr8:7301002 Chy01g01797 Chy-Chr1:23557232 2.98E-84 dispersed
Chy08g00310 Chy-Chr8:7301002 Chy01g00415 Chy-Chr1:2928050 4.37E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00310 K00430 - csv:101202852 624.009