Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00356 ATGGCGGAGGAGGCGTTGGCGGCAGTGATTGGTTTCTTGCACAAGCTTTTAACCGGACGGTGGTTAATGTTATTTGCATCACTAATAATCATGGCAATGAACGGATCAGGCTACATGTTCGGCCTCTACTCCAACCACATCAAATCCGTTTTTGGCTATGATCAATCGGCTCTTAATTTGATCAGTTTTTTTAAGGACTTGGGTGCCAATCTTGGGGTGGTTTCCGGCCTCCTTTACGAGGTGGCACCACCGTGGCTGGTTCTCTCGGTTGGCGCCATCCTCAACTTCTTCGGTTACTTCATGTTATGGTTGGCGGTTTCTGGCCGGACCGCTGCGCCGGGGTTGAGGTTGATGTGTGTTTACATGGGCGTTGCTGCTAACTCATTGTCTTTTGGTAATACGGCGGCTTTGGTTACTTGTCTTCGCAACTTTCCTCTTCATCGTGGTTGTCTTCTTGGCCTTCTCAAAGGGTACATAGGTTTAAGTGGTGCAATAATGACACAACTTTACCATGCCATGTATGGAGAGGACAACCCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCAGCCATTTCATTAGCTTCCCTTCCATTCATTCGACTTATAAACTCCAACAACAACCAACGAAATGACCTCAAACCATTCTATAACCTTCTTTACATATCCCTCGCCCTTGCTGCTTCTCTTCTTGCCATTATTATCCCTCAAACTAAAATTCACTTCTCTAAAACTGACTACATTGCTGTCGCTTCTCTCATCATTCTCTTTCTCCTCCTCCCGCTTGCCGTCGTCGTAAACCAAGAACTCACCCTCCACAATCACCCACCTCCAATAACGTCAATACTAGTACAATCACCGTCACCACAGCTAACAACGATGTCAAGGAGTAGTAACTGGTACACAAACATCTTCACGGGGCGACCAATGCTCGGAGACGACCACACCATCTTGCAAGCGATTTTGAGTGTGGATATGGCAATTCTATTTGTGGTGACGACGTGCGGTGTTGGCGGAGCACTGACGGTGGTTGACAACGTTGCACAAATAGGTGCTTCGTTAGACTATCCAACACGTAGCATTACGAGTTTCGTGTCACTAATGAGCATTTGGAACTTCCTAGGACGTGTAATGGCAGGTTATGTTTCTGAATTTCTTTTGATCAAGTACCGACTCCCTCGGCCGTTGATGCTCACATTTGTAATACTATTATCTTGCATTGGCCACATTATGATTGCGTTTGGAGTACCAAACTCTCTTTATTTTGCATCCATCGTCACTGGATTCTGCTTGGGAGCGCAACTGCCATTAACGGCCACAATCATATCTGATCTCTTTGGATTGAAACATTATTCGACGTTGTACAACGTGGGATCAGTGTCAAGCCCAGTTGGGTCTTACATTTTCAATGTTAGATTGGCGGGTAGGATTTATGATAGAGAGGGGGAAAGGCAAAGGAATGTGATGAGAAATGTGTGTAAAGGAGTGAGGTGTTATAGGGTTAGTTTTATAATAATCATTGGGGCTTGTGTTTTTGGTAGTTTGGTTTCGGTTATTTTGGTGCATAGGACAAGAAAGTTTTACAAAGATGACATATATGCAAGCTTTAGAAAGGGAGAAGAAATTAAAACACCACTACACACAACTACCACTACTTTTTCCCTCACACATCTAGAAGATGCTGGAATGAAACCTTAA 1701 44.44 MAEEALAAVIGFLHKLLTGRWLMLFASLIIMAMNGSGYMFGLYSNHIKSVFGYDQSALNLISFFKDLGANLGVVSGLLYEVAPPWLVLSVGAILNFFGYFMLWLAVSGRTAAPGLRLMCVYMGVAANSLSFGNTAALVTCLRNFPLHRGCLLGLLKGYIGLSGAIMTQLYHAMYGEDNPEGLILMIAWLPSAISLASLPFIRLINSNNNQRNDLKPFYNLLYISLALAASLLAIIIPQTKIHFSKTDYIAVASLIILFLLLPLAVVVNQELTLHNHPPPITSILVQSPSPQLTTMSRSSNWYTNIFTGRPMLGDDHTILQAILSVDMAILFVVTTCGVGGALTVVDNVAQIGASLDYPTRSITSFVSLMSIWNFLGRVMAGYVSEFLLIKYRLPRPLMLTFVILLSCIGHIMIAFGVPNSLYFASIVTGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRLAGRIYDREGERQRNVMRNVCKGVRCYRVSFIIIIGACVFGSLVSVILVHRTRKFYKDDIYASFRKGEEIKTPLHTTTTTFSLTHLEDAGMKP* 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8472078 8474610 - Chy8G149610.1 Chy08g00356 232142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00356 566 PANTHER FACILITATOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED 5 540 - -
Chy08g00356 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 540 - -
Chy08g00356 566 Gene3D MFS general substrate transporter like domains 323 530 IPR036259 -
Chy08g00356 566 CDD MFS_Mch1p_like 19 514 - -
Chy08g00356 566 SUPERFAMILY MFS general substrate transporter 250 529 IPR036259 -
Chy08g00356 566 Pfam Major Facilitator Superfamily 352 525 IPR011701 GO:0022857|GO:0055085
Chy08g00356 566 Pfam Nodulin-like 20 267 IPR010658 -
Chy08g00356 566 SUPERFAMILY MFS general substrate transporter 8 202 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00356 Chy-Chr8:8472078 Chy10g01289 Chy-Chr10:17397249 0 dispersed
Chy08g00356 Chy-Chr8:8472078 Chy10g01286 Chy-Chr10:17384287 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00356 - - csv:101220925 1046.96