Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00451 ATGGCCTTTTTGTGTTTTTGTTATCTCTCCATTTTCCTTGTTGTTGGGCTTCTTTCAAATTCCCAGTTCTTGGGAGCTCAGCTTGATGATCAAATCACTATGTCCACCATTAGAGAAGAGCTTCAAGTTCCTGGGTGGAGCTCTAGCATCTCTGAGTACTGCTCTTGGAAAGGTGTTCGTTGTGGTTTGAATCACTCCATGGTTGAAACTCTTGATCTTTCTGGTCATTCTCTTAGAGGTAATTTAACTATGATTTCTGAGCTCAAAGCTTTGAAATGGCTTGACCTATCCTACAATGACTTCCACGGCGAGATTCTGTTGAGTTTTGCAAAGTTACCGGAGCTCGAATTCCTTGATTTTTCTTCGAACAAATTTGATGGTTCGATTCCGCCTCAGCTTGGTGATCTCAAGAACCTCAAATCAGTGAACCTCTCCAATAATTTGTTGGTGGGAGAAATTCCAGATGAACTTCAAGGCTTAGAGAAGTTGCAAGATTTTCAAATTTCTAGCAACAGGTTAAATGGTTCAATTCCAAGTTGGGTTGGAAATTTGAGTCATCTAAGAGTCTTTACAGCCTATGAGAATAACTTTGGTGGTGTGATTCCGGATAATCTTGGTTCAGTTTCTGAGCTCCAAGTATTGAATCTGCATACGAACAGGCTTGAAGGCTCGATTCCTAGAAGCATTTTCGCTTCGGGGAAGCTTGAGATTTTGGTTCTTACACAAAACAGATTGACTGGCAATCTTCCTGAAGAGATTGGGAACTGCCAAAGGCTTACCAGCGTTCGAATCGGTAACAATAATCTTGTTGGTGTAATTCCTCCAGCCATTGGAAATGTTACTAGCCTTGCTTACTTTGAAGTGGATAACAATCACCTTTCAGGCGATATAGTGTCTCAGTTTTCGAGGTGCTCTAATCTTACACTGCTGAATCTAGCCTCAAACGGATTCACTGGGATGATTCCTCCTGAACTTGGAGAGCTCATGAATCTGCAGGAGCTTATTCTTTCTGGTAATAGTCTGTATGGTGACATTCCGGGATCAATGCTCGAATGCAAGAATCTCAACAAGCTTGATTTAAGCAGCAATAGATTTAATGGTACTATTCCCTCAGATATATGCAATATATCAAGATTGCAGTACTTACTTTTGGAACAGAATTCAATAAAAGGAGAGATACCTAATGAGATTGGAAAATGTACAAAGCTTCTTGACCTGCGACTTGGTAGTAACTATCTAACTGGAAGCATCCCTTCCGAGATTGGTCGTATTAAGAACTTACAGATAGCTTTGAACTTGAGCTTCAATCATCTAAATGGACAAGTGCCTCCTGAGTTGGGAAAACTTGATAAACTGGTTACTTTAGATTTATCAAACAATCATCTCTCGGGCGATATCCCTTCTGAGCTCAAGGGCATGTTAAGCTTGATAGAGGTGAATTTTTCAAATAATCTGCTTACAGGTTCAATTCCTTTCTTTGTTCCATTCCAGAAAAGTGCAAATTCTAGTTTTCTGGGGAACGAAGGCCTTTGCGGGGCGCCACTAAGCATTACGTGTAAGAATTCGATTGGTCCATACAATCAAGATTACCATCACAAGGTCTCATACAAGATCATACTGGCTGTCATTGGTTCCGGTCTGGCAGTTTTTGTATCTGTTACTATAGTTGTCCTACTTTTTGTGATGAAGGAAAAGCAGGAAAAAGCAGCAAAATCTTCAGGGACCGCAGATGATGAAACTATCAATGACCAACCACCGATAATAGCAGGAAATGTCTTCGACGATAATCTCCAACAGGAAATCGATCTCGATGCAGTCGTTAAAGCAACTTTGAAGGATTCAAACAAGCTCATCTTTGGGACTTTTAGTACTGTTTATAAGGCGATCATGCCTTCGGGTATGATCATATCAGTTAAGAGATTAAAATCCATGGACAAGACTATTATTCATCATCAAAGCAAGATGATTAGAGAGCTTGAAAGGCTTGGCAAATTGAACCATGCTAATCTTTTGCAACTCATTGGATATGTAATATATGAGGATGTGGCTCTGTTGCTTCACAATTACTTAACCAATGGAACATTGGCTCAGCTTCTTCATGAATCCACAAAACAACCTGAATATGAACCTGATTGGCCCACGAGATTTTCCATTGCCATTGGAGCAGCAGAAGGGCTTGCTTTTCTTCATCATGTGGCCATAATCCATCTTGATATTTCATCATCTAATGTTTTTTTAGATGCCAACTTCAAACCTTTGGTTGGAGAAGTTGAGATCTCAAAACTTTTAGATCCATCAAGAGGAACTGCAAGTATTAGTGCTGTTGCAGGTTCATTTGGCTACATTCCACCAGAATATGCTTATACAATGCAAGTTACAGCCCCGGGAAACGTCTATAGCTACGGTGTCATCTTGCTTGAGATCCTCACTACCAGACTGCCAGTTGATGAGGAGTTTGGTGAAGGAGTAGACTTGGTGAAATGGGTGCATAGTGCTCCATCGAGGGGTGAAACACCCGAACAGATACTCGATTCCCGGCTGAGCACGGTGTCGTTCGGATGGAGGAAGGAGATGCTTGCGGCTCTCAAGATTGCATTGCTCTGCACTGACAGCATACCAGCCAAAAGGCCAAAAATGAAGAAGGTGGTGGAAATGCTTTCGGAGATTAAGCAAAATTGA 2679 41.17 MAFLCFCYLSIFLVVGLLSNSQFLGAQLDDQITMSTIREELQVPGWSSSISEYCSWKGVRCGLNHSMVETLDLSGHSLRGNLTMISELKALKWLDLSYNDFHGEILLSFAKLPELEFLDFSSNKFDGSIPPQLGDLKNLKSVNLSNNLLVGEIPDELQGLEKLQDFQISSNRLNGSIPSWVGNLSHLRVFTAYENNFGGVIPDNLGSVSELQVLNLHTNRLEGSIPRSIFASGKLEILVLTQNRLTGNLPEEIGNCQRLTSVRIGNNNLVGVIPPAIGNVTSLAYFEVDNNHLSGDIVSQFSRCSNLTLLNLASNGFTGMIPPELGELMNLQELILSGNSLYGDIPGSMLECKNLNKLDLSSNRFNGTIPSDICNISRLQYLLLEQNSIKGEIPNEIGKCTKLLDLRLGSNYLTGSIPSEIGRIKNLQIALNLSFNHLNGQVPPELGKLDKLVTLDLSNNHLSGDIPSELKGMLSLIEVNFSNNLLTGSIPFFVPFQKSANSSFLGNEGLCGAPLSITCKNSIGPYNQDYHHKVSYKIILAVIGSGLAVFVSVTIVVLLFVMKEKQEKAAKSSGTADDETINDQPPIIAGNVFDDNLQQEIDLDAVVKATLKDSNKLIFGTFSTVYKAIMPSGMIISVKRLKSMDKTIIHHQSKMIRELERLGKLNHANLLQLIGYVIYEDVALLLHNYLTNGTLAQLLHESTKQPEYEPDWPTRFSIAIGAAEGLAFLHHVAIIHLDISSSNVFLDANFKPLVGEVEISKLLDPSRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVILLEILTTRLPVDEEFGEGVDLVKWVHSAPSRGETPEQILDSRLSTVSFGWRKEMLAALKIALLCTDSIPAKRPKMKKVVEMLSEIKQN* 893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11129117 11131891 + Chy8G150560.1 Chy08g00451 232237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00451 892 ProSiteProfiles Protein kinase domain profile. 611 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00451 892 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 890 - -
Chy08g00451 892 Pfam Protein kinase domain 615 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00451 892 Pfam Leucine rich repeat 330 389 IPR001611 GO:0005515
Chy08g00451 892 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 10 890 - -
Chy08g00451 892 Gene3D Phosphorylase Kinase; domain 1 580 689 - -
Chy08g00451 892 CDD STKc_IRAK 620 889 - -
Chy08g00451 892 Gene3D Ribonuclease Inhibitor 178 231 IPR032675 -
Chy08g00451 892 SUPERFAMILY L domain-like 265 516 - -
Chy08g00451 892 ProSitePatterns Tyrosine protein kinases specific active-site signature. 734 746 IPR008266 GO:0004672|GO:0006468
Chy08g00451 892 Gene3D Transferase(Phosphotransferase) domain 1 690 892 - -
Chy08g00451 892 Pfam Leucine Rich Repeat 451 472 IPR001611 GO:0005515
Chy08g00451 892 Gene3D Ribonuclease Inhibitor 30 177 IPR032675 -
Chy08g00451 892 SUPERFAMILY Protein kinase-like (PK-like) 613 886 IPR011009 -
Chy08g00451 892 Gene3D Ribonuclease Inhibitor 232 522 IPR032675 -
Chy08g00451 892 SMART LRR_typ_2 136 159 IPR003591 -
Chy08g00451 892 SMART LRR_typ_2 328 352 IPR003591 -
Chy08g00451 892 SMART LRR_typ_2 160 184 IPR003591 -
Chy08g00451 892 SMART LRR_typ_2 208 232 IPR003591 -
Chy08g00451 892 SMART LRR_typ_2 376 400 IPR003591 -
Chy08g00451 892 SMART LRR_typ_2 449 472 IPR003591 -
Chy08g00451 892 SMART LRR_typ_2 112 135 IPR003591 -
Chy08g00451 892 SUPERFAMILY L domain-like 36 346 - -
Chy08g00451 892 Pfam Leucine Rich repeats (2 copies) 113 155 IPR025875 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01185 Chy-Chr1:13889757 Chy08g00451 Chy-Chr8:11129117 7.29E-161 dispersed
Chy08g00451 Chy-Chr8:11129117 Chy12g01139 Chy-Chr12:16342205 6.80E-38 dispersed
Chy10g00309 Chy-Chr10:7756346 Chy08g00451 Chy-Chr8:11129117 2.48E-122 dispersed
Chy08g00451 Chy-Chr8:11129117 Chy12g00907 Chy-Chr12:14466675 3.00E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71423 PF00069 Pkinase 1.10E-26 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00451 - - csv:101215786 1714.51