Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00518 ATGATTGATTCTATCAAGGCTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCATCTCTTGGGGTTCTCACTTCCGTTCTCTACTCAGCCGCCGGTGTTTATGGAATCCCACTTCACCCACTTCTTATCACTACTACTCTTGTTTTCATTCTTGTTTTTGTTTTTAATATAATTGGTGCTCTTTTGGGTGGAGCTAGTTTTAATCCTACTGCCACTGCTGCTTTTTATGCTGCTGGTGTTGGTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCAGCTCAGGCGGCTGGTGCGGTTGCTGGTGCCCTTGCGATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGTCCTTCTTTGAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGGGGTCCCTCCAGCCCTGTTATCAAAACATGGTTGCTGGCAATGGCCACTGTAGCGTTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCATTTGGATGGGCATATATAAACAACAGGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCTCCCCCTTTGTAGGAGCCATTTTGGCCGCTTGGCTTTTCAGAATGATCTTCCCACCACCACCCCCACCCCCGGCCAAGCAGAAGAAAGCTTAA 732 47.13 MIDSIKAAIGDAVLTSMWIFCASSLGVLTSVLYSAAGVYGIPLHPLLITTTLVFILVFVFNIIGALLGGASFNPTATAAFYAAGVGPTSLFAMAIRFPAQAAGAVAGALAIKEVMPIQYKHMLGGPSLKVDIHSGATAEGVLTFIISFAVLLIVLRGPSSPVIKTWLLAMATVALIVAGSSYTGPSMNPANAFGWAYINNRHDTWEQLYVYWISPFVGAILAAWLFRMIFPPPPPPPAKQKKA* 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12405477 12409069 + Chy8G151230.1 Chy08g00518 232304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00518 243 Pfam Major intrinsic protein 3 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy08g00518 243 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy08g00518 243 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy08g00518 243 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy08g00518 243 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy08g00518 243 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy08g00518 243 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy08g00518 243 SUPERFAMILY Aquaporin-like 4 239 IPR023271 -
Chy08g00518 243 PANTHER AQUAPORIN SIP1-1 3 242 - -
Chy08g00518 243 Gene3D Glycerol uptake facilitator protein. 2 234 IPR023271 -
Chy08g00518 243 PANTHER AQUAPORIN SIP1-1 3 242 IPR044222 GO:0015250
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01691 Chy08g00518 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00518 Chy-Chr8:12405477 Chy10g01323 Chy-Chr10:17592391 6.13E-13 dispersed
Chy08g00518 Chy-Chr8:12405477 Chy04g02069 Chy-Chr4:26182920 3.24E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00518 K09875 - csv:101220534 426.017