Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00536 ATGGCTGCTTACGCTTTGCTCAACGATTCCACCCCCCGTGGTGTTAATGGCGGTTTTGATGATAGTCCTTTGACTAGTGCTTCCACTAATAGCAACGGTAGTGACGAACTTAATCATCAACAGATTGTTCAGGTTCCTCAACCAAGATTGCCGGTTGGAAAAATGGTGAGGAAGAGAATCGCCTCGGAGATGGAGATTGAAGGACTCGACAGCGGCGGCGGCGGCGGCGGCGGCGGTAGTGGAGGTACTACTGCTGTTCATCCACGGTTTTGCCGGCGGAGTCTAGCTTCTGATCGTCCTTTTGGAGAAAATAAAACGAATGTGAATTATTGTTCCTCTTCTTCAAACCCTAGCCATGGCGGCAACCACTCCACTGTTGTGCATAATTTAACCGCTCTGACGTCAGTTGTAATCGAAGGGTCAAATTTATCAAACCCTCCTTCTGGTTCTGATGCTACGGTCTCTTCCACTACCTCCAACAACAATCTTCTTGATAGTACTCTTCCTGTTCTTCGTCCTCAACCCCACCATCACCATTTGCAGAATCCTGCAGTCTGTGGTTTTTCTGGCTTGCCTTTGTTTCCACCGGAATCAAATCACCACCATAATAAGTTAAATACTCGTAATAACCCTTTTCCTCTTCCTAATCCATCTCAGGTTCTTCTTCATAATCCTCCTACTACTGCTACTACCTCCATTATCGCCGCCGCTTCTTCTCCCATGGATGATTCCTCCGCCACTGCTTGGATCGACGGTATCATTAAGGACTTAATTCATAGCTCCACTGCCATATCCATTCCTCAGCTCATTCAGAACGTTCGTGAGATTATCTACCCTTGTAACCCAAATCTTGCGAATCTTCTTGAGTTTCGTCTTCGTACTTTGACGGACCCTAGTGTTCCTAACTTCGCTACTGAGGATCATCGAGTGAGAAAGTCCCCTTTGCCGTTGACGGCGCCGGTTGCTGGACTGGGGTTGCAGCAGAGGCAGTTTAACCAAGAGCAGCATGAACAAGAACATGATTGTTCTGGACTAAAGCTTAATCTTGATTCTACTTCTCTGCACAATCTTTCTAATTTTCCCTCTCAGCCGCCGTTTCATGAGCCGTACCTTCAATGGGGGGCAACCCCGCCTGTCCCCACTTCCTCCGCGGCTGCCGCCGGCGAGGATGCCTTACAGCGCCTCCCTGGTCATCATCAACTTAATCTATCGTCCGTTACACCGTCGTCGCTTGTTTCTTTAAATCATGTCCCTTCTAAGCCACAATCAGAACAGCAGAACTCTTGTACTAAGGCGGCGGCGGCTGCACAGCCAGCTCCAGCACCACCATCGACGAGCAATAACCCTTCAGCGACTGCTTTGCTGATTAGAGAGATAAAAGAGGAGATGAGGCAGCAGAAGAGAGACGAAGAAGGGCTACATCTCTTGACTTTGCTTCTTCAATGCGCAGAAGCCGTTTCAGCTGATAATTTAGAAGAAGCCAACAAGATGCTCTTGGAAATCTCCGAGCTATCGACACCGTTCGGCACATCGGCGCAGAGGGTGGCGGCGTATTTCTCTGAAGCAATGTCGGCGAGGCTTGTGAGCTCTTGTTTGGGCATATATGCATCTCTGCCGCCGTCGTTGGTACCCCATACACACAGCCAGAAAATAGCCTCAGCCTTCCAAATCTTCAATGGCATAAGCCCATTTGTCAAATTCTCACATTTCACAGCCAATCAAGCCATACAAGAAGCTTTTGAAAGAGAAGAGAGAGTTCACATCATAGATCTAGACATCATGCAAGGGCTTCAATGGCCTGGCCTGTTCCACATCCTGGCGTCTAGACCCGGTGGGCCGCCGTACGTCCGCCTTACAGGGCTGGGGACCTCTCAGGAAGTTCTTGAAGCCACTGGCAAACGCCTCACTGAATTTGCTGAGAAGCTTGGCCTTCCGTTTGATTTCTTTCCCGTGGCTGATAAAATTGGCAATCTAGACTTGGAAAGGCTCAACGTGAGCAAGAGAGAAGCCGTTGCTGTTCATTGGATGCAGCATTCTCTTTATGAAGTTACTGGTTCCGATTCCAATACGCTATGGCTTTTGCAAAGATTGGCTCCGAAAGTTGTGACGGTGGTGGAACAAGATCTGAGCCACACAGGCTCTTTCTTGGGGAGATTCGTTGAAGCCATTCATTACTATTCAGCACTGTTTGACTCATTAGGTGTGAGCTATGGCGAAGAGAGTGAAGAAAGACATTTAGTGGAGCAGCAACTGTTATCAAGGGAAATCAGAAACGTGTTGGCTGTCGGAGGGCCGTCGAGGAGCGGCGAAGTGAAGTTCCAAAACTGGAGAGAAAAACTGCAGCAATCTGGGTTTAAGGGGATTTCCCTCGCCGGAAATGCTGCAACTCAGGCCACTCTCCTCCTCGGAATGTTCCCTTCCGATGGGTATACGCTTGTAGAAGACAATGGTACTTTGAAACTTGGGTGGAAGGATCTTTGTTTGCTCACGGCCTCAGCTTGGAAGCCGCCGTTTCATCATCATGCGGCGGTCACCAACAACCATATTCCCCGTTACTGA 2559 48.96 MAAYALLNDSTPRGVNGGFDDSPLTSASTNSNGSDELNHQQIVQVPQPRLPVGKMVRKRIASEMEIEGLDSGGGGGGGGSGGTTAVHPRFCRRSLASDRPFGENKTNVNYCSSSSNPSHGGNHSTVVHNLTALTSVVIEGSNLSNPPSGSDATVSSTTSNNNLLDSTLPVLRPQPHHHHLQNPAVCGFSGLPLFPPESNHHHNKLNTRNNPFPLPNPSQVLLHNPPTTATTSIIAAASSPMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVREIIYPCNPNLANLLEFRLRTLTDPSVPNFATEDHRVRKSPLPLTAPVAGLGLQQRQFNQEQHEQEHDCSGLKLNLDSTSLHNLSNFPSQPPFHEPYLQWGATPPVPTSSAAAAGEDALQRLPGHHQLNLSSVTPSSLVSLNHVPSKPQSEQQNSCTKAAAAAQPAPAPPSTSNNPSATALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYASLPPSLVPHTHSQKIASAFQIFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLEATGKRLTEFAEKLGLPFDFFPVADKIGNLDLERLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKPPFHHHAAVTNNHIPRY* 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12746775 12749745 - Chy8G151410.1 Chy08g00536 232322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00536 852 MobiDBLite consensus disorder prediction 412 433 - -
Chy08g00536 852 MobiDBLite consensus disorder prediction 412 449 - -
Chy08g00536 852 MobiDBLite consensus disorder prediction 1 40 - -
Chy08g00536 852 PANTHER PROTEIN SCARECROW 158 837 - -
Chy08g00536 852 Pfam GRAS domain family 476 835 IPR005202 -
Chy08g00536 852 MobiDBLite consensus disorder prediction 21 40 - -
Chy08g00536 852 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 158 837 IPR005202 -
Chy08g00536 852 MobiDBLite consensus disorder prediction 141 169 - -
Chy08g00536 852 MobiDBLite consensus disorder prediction 141 168 - -
Chy08g00536 852 ProSiteProfiles GRAS family profile. 466 835 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01456 Chy-Chr1:20256861 Chy08g00536 Chy-Chr8:12746775 2.18E-107 dispersed
Chy07g01075 Chy-Chr7:15698434 Chy08g00536 Chy-Chr8:12746775 1.95E-162 dispersed
Chy08g00536 Chy-Chr8:12746775 Chy09g00488 Chy-Chr9:4725309 3.79E-69 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18405 PF03514 GRAS 8.40E-127 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00536 - - bhj:120074183 1488.78