Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00567 ATGAAGGAAATTCGTGGTCTTGCATTTGCATTTGCATTTGCATCTATATCTGTTTTCGTTTCCTTGTTCTTCGATGTTCATGTGGTTTTAGCACAAAATTACATCCCTCGGGATGTCATTCTCCTTGATTGTGGAGGACCTTCAACTGCAAACGACATCGACAAGCGGAAATGGAATACCGATGACAAATCTAAGTTTGTTCCGGCGACAGGGGATAGCTCTGTATCGAAAGCCGCTACTCAGGATCCTTCAGTTCCTGATATCCCTTTCATGACGGCTAGGGTTTTTAGTTCTAGTTTCACCTACAGCTTTCCTGTGGCTCCTAGTCGTTTATTTGTTCGTCTCTACTTTTACCCTTCTTCTTATGGTGGACTTGATGCATCTGATGCTCTGTTCTCTGTTTCCACTCAATCCTATACTCTTCTTAAGAACTTCAGCGCTTCACAAACGGCTGCAGCTTTGAATTATGCCTATATCATTAAGGAATACTCTATCCATGTTGATGATGATAGGTTGAACTTGACTTTCATTCCATCCTCCACTCATCCAAAGGCTTATGCATTTGTGAATGGGATTGAGATTGTATCTATGGCTGATATTTATAGTGATACTTCTGGGAGTACCCTGATTGTTGGTCCATCTACTCCATTCACTGTGGACAATTCCACTGCGCTTGAGAACGTCTATCGGCTGAATGTCGGGGGGAATGATATTTCGCCTTCTGATGATACCGGGATGTATAGGTCTTGGTTTGATGATACTCCATTCTTGTATGGGGCAGCACAGGGAGTGACGATGAGTACTGATCAAAACACAACGCTTAATTATCCACCGGGCTTTCCTACTTATGTTGCACCCGAGAATGTCTACTCCACTGCTAGAGCAATGGGACCTGATAACAATGTCAATCTGAATTATAACTTGACATGGATTTTCCCTGTTGACTCTGAGTTCTTTTACCTTGTTAGGCTTCATTTTTGTGAGGTTGCTGCAAATATCACAAAAGTCAACCAAAGGGTGTTCGACATTTTCCTTTATAATAAAACTGCTATGGATAGTGCTGATGTGATTGCCTGGGCTGGAAGTAATGATACTCCTTTGTACAAAGATTATGTGGTTTTTGTTCCTGCTAATGGAAATCCACAGCAGGATTTATGGCTTGAACTGCATCCAGACAAGACCATGCTTCCCAATTACTATGATGCAATCTTAAATGGAGTGGAGATATTCAAAATTAGTGACTCGAGCGCTAATCTTGCTGGGCTAAATCCTAGTCCTGCTCCAAAACAGGACAATATTGATCCATCATTAGCTAAGCCAGCTTCTCACAGTAAATCAAAGAATAATTCAGGGGTGATTGCTGGAGTTGTTTGTGGAGCAGTTGCTTTAGCTCTGATTATTGGTTTCTTTGTTTTTGCTAAACGTCGCCGTGGGCGTGGTAAAGATTCTAGTACTGTTGAAGGACCGTCGGGATGGCTCCCTCTTTCTCTCTATGGAAATTCCCATTCAGCTGGATCTGCTAAGACAAATACAACTGGAAGCTATACATCCTCCCTGCCTTCTAACCTTTGCCGCCACTTCTCATTTTCTGAGATCAACACTGTTGTGAAAGGTAGTTTCGGATACTTGGATCCTGAATACTTTAGGCGACAACAATTGACCGACAAATCAGATGTTTATTCCTTCGGAGTTGTTCTCTTTGAAGTCCTATGTGCTCGGCCAGCCTTGAACCCAACACTCCCTAAGGAGCAAGTGAGTTTAGCTGAATGGGCTGCGCACTGCTACAACAAAGGCATTTTAGATCAGATAATCGACACATTCCTTAAAGGGAAGATCGCATCAGAATGTCTCAAGAAGTTCGCAGAGACAGCAATGAAATGTGTATCTGATCAGGGAATCGACAGGCCATCGATGGGCGATGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAGGAGAGCGCAGAAGAGAGTGGCAAGGTAGGCAGTGGGATGGATGTGGAAGAAGGTCAACTGGATGTAGTTTACAAAGGGAAGAAGGATCCAGATGCTTCCCCCGGTATTGATGGAAACATAACCGACTCAAGAAGCACCGGAATCAGTATGAGCATTGGAAGCCGAAGTCTTGCCAGTGAAGATTCAGACGGGTTGACGCCGAGTGCTGTGTTCTCACAGATCATGAACCCAAAAGGACGTTAA 2199 43.52 MKEIRGLAFAFAFASISVFVSLFFDVHVVLAQNYIPRDVILLDCGGPSTANDIDKRKWNTDDKSKFVPATGDSSVSKAATQDPSVPDIPFMTARVFSSSFTYSFPVAPSRLFVRLYFYPSSYGGLDASDALFSVSTQSYTLLKNFSASQTAAALNYAYIIKEYSIHVDDDRLNLTFIPSSTHPKAYAFVNGIEIVSMADIYSDTSGSTLIVGPSTPFTVDNSTALENVYRLNVGGNDISPSDDTGMYRSWFDDTPFLYGAAQGVTMSTDQNTTLNYPPGFPTYVAPENVYSTARAMGPDNNVNLNYNLTWIFPVDSEFFYLVRLHFCEVAANITKVNQRVFDIFLYNKTAMDSADVIAWAGSNDTPLYKDYVVFVPANGNPQQDLWLELHPDKTMLPNYYDAILNGVEIFKISDSSANLAGLNPSPAPKQDNIDPSLAKPASHSKSKNNSGVIAGVVCGAVALALIIGFFVFAKRRRGRGKDSSTVEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFSEINTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLPKEQVSLAEWAAHCYNKGILDQIIDTFLKGKIASECLKKFAETAMKCVSDQGIDRPSMGDVLWNLEFALQLQESAEESGKVGSGMDVEEGQLDVVYKGKKDPDASPGIDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR* 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13247160 13249853 - Chy8G151720.1 Chy08g00567 232353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00567 732 Gene3D - 38 198 - -
Chy08g00567 732 Gene3D - 224 413 - -
Chy08g00567 732 MobiDBLite consensus disorder prediction 690 725 - -
Chy08g00567 732 PANTHER - 532 698 - -
Chy08g00567 732 SUPERFAMILY Protein kinase-like (PK-like) 523 643 IPR011009 -
Chy08g00567 732 PANTHER - 24 533 - -
Chy08g00567 732 PANTHER OS07G0166700 PROTEIN 532 698 IPR045272 GO:0004714|GO:0006468
Chy08g00567 732 PANTHER OS07G0166700 PROTEIN 24 533 IPR045272 GO:0004714|GO:0006468
Chy08g00567 732 MobiDBLite consensus disorder prediction 678 732 - -
Chy08g00567 732 MobiDBLite consensus disorder prediction 421 447 - -
Chy08g00567 732 Gene3D Transferase(Phosphotransferase) domain 1 503 651 - -
Chy08g00567 732 Pfam Malectin-like domain 42 412 IPR024788 -
Chy08g00567 732 Pfam Protein tyrosine and serine/threonine kinase 540 642 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01207 Chy-Chr5:16516978 Chy08g00567 Chy-Chr8:13247160 1.56E-166 dispersed
Chy08g00567 Chy-Chr8:13247160 Chy12g00880 Chy-Chr12:14143049 2.63E-94 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71430 PF12819 Malectin_like 8.70E-41 CL0202 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00567 - - csv:101211171 1020.38