Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00585 ATGCCGGCCTTCCACGACGACACCCCTCCCCCGGGACTCCCCCGTGCCGACTCCTTGCCGGAGGGAATTCTCTTCGGCAAATACGAACTCGGCAAGCTTCTCGGTTGTGGAGCTTTTGCCAAGGTCTACCACGGAAGAAACGTCCTCACAGGACAGAGTGTCGCCATTAAAGCTGTTAACAAACTCAAGGTTCTCAAAGGCGGTTTCACGGCGCATGTTAAGAGAGAAATCGCTATCATGCGCCGTCTCCGTCATCCCAACGTCGTTCGTCTCTTTGAAGTTCTAGCCACCAAGACCAAAATTTATTTCGTTATGGAGTATGCAAAAGGAGGTGAGCTCTTCGGGAAAGTTTCTAAAGGAAGGTTCAGTGAGAATCTCAGTCGTCGGTATTTTCAGCAGTTGATTACCGCCGTTGGATATTGTCACTCTCGAGGGATTTTTCATCGTGATTTGAAACCGGAGAATCTCCTTCTTGATGACAATTTCGATCTCAGAGTCTCGGATTTTGGACTTAGTGCTCTTGCAGATCAGATTCGTCCTGATGGATTGCTTCATACGCTTTGTGGAACTCCGGCTTATGTCGCACCGGAGATTCTCGCTAAGAAAGGCTACGATGGCGCTAAAATCGATGTCTGGTCTTGTGGTATAATCCTCTATGTTCTTACTGCTGGATATCTTCCTTTCAACGATTCCAATTTAATGGCCATGTATCGGAAGATTTACAGAGGCGATTTCCGTTGCCCCAAGTGGACGTCTCCAGATCTGCAACGGTTTATATCCAGACTACTTGATACGAATCCTGAGACAAGGATTACTGTTGATGAGATTCAACGAGATCCGTGGTTTGTGAAGGGATTTCAAGAGGAGAAGTTTCAATTTCAAGAACTCGATGACTCTGCTTCCGAGGTTTACGGTGATGTGAACAATGCGAAATGTTTGAATGCTTTTGATCTAATTTCGTTCTCACCTGGTTTTGATTTGACTGGATTGATTAAAGAAGAGACGGAGTTTTCTTCATGCGTTGAGCGGTTTCTGTCCGCTGAATCGCCTGAGAAGATAATTGTGACGGTTGAGGAGGTTACAAAGTCGGAGAATGCGGCGGTAGAGAAGAACGGTTGGGGAATGAAAGTGGAAGGACTTGACGGTGGATTCGTGGTGGTGATTGATATTTTCCGGCTGACGGAGGAATTGGTGGTTGTTGAGATTAAGAACAGAGTGAGGGAAATAGAGCAAGATCGTCAAATTTGGAAAGATGTATTGAGACCTCAACTTGACTGTTTAATCTACCGGTCGGATTGA 1299 46.11 MPAFHDDTPPPGLPRADSLPEGILFGKYELGKLLGCGAFAKVYHGRNVLTGQSVAIKAVNKLKVLKGGFTAHVKREIAIMRRLRHPNVVRLFEVLATKTKIYFVMEYAKGGELFGKVSKGRFSENLSRRYFQQLITAVGYCHSRGIFHRDLKPENLLLDDNFDLRVSDFGLSALADQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKIDVWSCGIILYVLTAGYLPFNDSNLMAMYRKIYRGDFRCPKWTSPDLQRFISRLLDTNPETRITVDEIQRDPWFVKGFQEEKFQFQELDDSASEVYGDVNNAKCLNAFDLISFSPGFDLTGLIKEETEFSSCVERFLSAESPEKIIVTVEEVTKSENAAVEKNGWGMKVEGLDGGFVVVIDIFRLTEELVVVEIKNRVREIEQDRQIWKDVLRPQLDCLIYRSD* 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13537358 13538656 + Chy8G151900.1 Chy08g00585 232371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00585 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Chy08g00585 432 SUPERFAMILY Protein kinase-like (PK-like) 24 296 IPR011009 -
Chy08g00585 432 Gene3D Kinase associated domain 1, KA1 314 430 - -
Chy08g00585 432 CDD CIPK_C 314 425 - -
Chy08g00585 432 Gene3D Transferase(Phosphotransferase) domain 1 22 313 - -
Chy08g00585 432 PANTHER - 21 430 - -
Chy08g00585 432 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Chy08g00585 432 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 21 430 - -
Chy08g00585 432 Pfam NAF domain 311 370 IPR004041 GO:0007165
Chy08g00585 432 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00585 432 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00585 432 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00585 432 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00585 Chy-Chr8:13537358 Chy11g01388 Chy-Chr11:20292311 0 dispersed
Chy08g00585 Chy-Chr8:13537358 Chy08g00586 Chy-Chr8:13578622 3.23E-137 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71434 PF00069 Pkinase 1.30E-70 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00585 - K12761 csv:101208826 870.922