Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00586 ATGGAGAACAAAGGGGCTATCTTGATGGAACGTTATGAATTAGGAAGGCTGCTGGGACAGGGGACCTTTGCCAAGGTTTACTATGCTAGAGACATTAAAAGTGGCATAAGTGTGGCTATTAAAATTATTGACAAAGAAAAAATCTTGAAGGTTGGAATGATTGATCAAATCAAGAGGGAAATCTCTGTCATGAGATTAATTAAGCATCCCAACGTCGTTGAGCTTTATGAGGTTATGGCAAGTAAAACCAAAATTTACTTTGTCATGGAATATGTCAAAGGTGGCGAGCTATTCAACAAGGTATCAAAAGGAAAGCTTAAAGAATCTGTTGCACGGAAATATTTTTGGCAGCTGATCAGTGCTGTTGATTATTGCCATAGTCGAGGGGTATGCCATAGAGATTTGAAACCGGAAAATTTATTATTGGATGAACATGGTAATCTGAAGGTTTCTGATTTTGGGTTGAGTGCTCTTGCTGAATCTAAACGCCAAGATGGACTTCTCCATACTACTTGTGGAACCCCTGCTTATGTTGCTCCAGAAGTCATTAACAGGAGAGGTTATGATGGATGCAAAGCTGATATTTGGTCGTGTGGAGTGATTTTATATGTTTTATTGGCCGGTTATCTCCCTTTCCATGATCCTAATCTAATGGAGATGTATAAGAAGATTGGAAAAGGAGAATTTAAATTTCCTAACTGGTTTGCGCCAGAAGTGCGCAAGCTGTTGTCAAAGATATTAGATCCTAACCCAAATACCAGGATATCAATTGCCAAAATAATGGGAAGTTCTTGGTTAAGGAGGGAGTTGAATGTGAAACCACGAGTTAATGCAGCAGAGGAAGTGAATGAAGGGGATCCTTTGGATGTTGGTGCAGTTTTTGTGTCGACAGCTGAGGACCGAGACTCTGTTAAAGATCAGAAGCCAGAAATGGAAAAGCCATTGAATTTAAATGCTTTCGACATAATCTCCTTGTCATCAGGTTTTGATTTGTCAGGATTATTCGAGGATGCTGATCTAAAGAAAGAAGTGAGATTCACATCAAACAAGCCTGCTTCCGTGATCATCTCAAAACTGCAAGACATTGCAAAGTGCCTGAAATTGAAAATCAAGAAGAAAGACAGAGGCCTACTGAAGATTGAAGGGTGTAAGGAAGGTCGAAAAGGAGCCGTATGTATTGATGCAGAGATTTTTGAAGTTACCCCATCATTCCATATAGTGGAAATGAAGAAGTCAAACGGAGATACATTGGAATATCGCAAGATAATGAAAGATAATATAAGACCTGCTCTGAAGGACGTTGTGTGGACCTGGCAAGGCGAACACGAACAGCAACCGAGACAGCTATTACCAGCAGAACAACAACAAGGACATGAAGCTCAACAACAATCTTCTCGTGATTCATTATAA 1410 39.86 MENKGAILMERYELGRLLGQGTFAKVYYARDIKSGISVAIKIIDKEKILKVGMIDQIKREISVMRLIKHPNVVELYEVMASKTKIYFVMEYVKGGELFNKVSKGKLKESVARKYFWQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILYVLLAGYLPFHDPNLMEMYKKIGKGEFKFPNWFAPEVRKLLSKILDPNPNTRISIAKIMGSSWLRRELNVKPRVNAAEEVNEGDPLDVGAVFVSTAEDRDSVKDQKPEMEKPLNLNAFDIISLSSGFDLSGLFEDADLKKEVRFTSNKPASVIISKLQDIAKCLKLKIKKKDRGLLKIEGCKEGRKGAVCIDAEIFEVTPSFHIVEMKKSNGDTLEYRKIMKDNIRPALKDVVWTWQGEHEQQPRQLLPAEQQQGHEAQQQSSRDSL* 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13578622 13580031 - Chy8G151910.1 Chy08g00586 232372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00586 469 PANTHER - 2 450 - -
Chy08g00586 469 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Chy08g00586 469 MobiDBLite consensus disorder prediction 445 469 - -
Chy08g00586 469 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Chy08g00586 469 Gene3D Transferase(Phosphotransferase) domain 1 4 319 - -
Chy08g00586 469 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00586 469 Pfam NAF domain 314 372 IPR004041 GO:0007165
Chy08g00586 469 CDD CIPK_C 318 432 - -
Chy08g00586 469 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Chy08g00586 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Chy08g00586 469 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 450 - -
Chy08g00586 469 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00586 469 CDD STKc_SnRK3 11 265 - -
Chy08g00586 469 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00586 469 Gene3D Kinase associated domain 1, KA1 320 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00369 Chy-Chr5:3929425 Chy08g00586 Chy-Chr8:13578622 2.14E-129 dispersed
Chy08g00586 Chy-Chr8:13578622 Chy11g01389 Chy-Chr11:20296741 0 dispersed
Chy08g00585 Chy-Chr8:13537358 Chy08g00586 Chy-Chr8:13578622 3.23E-137 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71435 PF00069 Pkinase 1.10E-75 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00586 K07198 - csv:116406388 892.108