Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00612 ATGGCCACAAGCGTATCACACTCTCCCGATTTCCGTCCTGAAGTTTCCGTTACGCCGCCGAACCACGACGGCCTTTACTTCTGGCAGTTCATGATCGCCGGCTCAATCGCGGGGTCGGTCGAGCACATGGCGATGTATCCAGTGGACACTCTCAAGACCCGAATACAGGCCTTAGGTGGTGGATCGTCAACAGTCCGACAAGCCCTCGGCTCGATTCTGAAAGTGGAAGGTCCGGCTGGGCTTTACCGTGGAATCGGAGCAATGGGTTTAGGCGCAGGACCTGCACACGCCGTCTACTTCTCAGTATACGAGTTTGCGAAAGAAGGGTTTTCAATGGGGAATAAGAACAACCCATTAGCGCACGCCATTGCTGGAGTTTGTGCGACGGTGACGAGTGACGCTGTGCTAACGCCGATGGATGTAGTGAAACAAAGGCTGCAGTTGAAAAGTAGTCCTTATAAAGGAGTGGGGGACTGTGTGAAGAGGATTTTGGTTGAGGAAGGGATTGGGGCGTTGTATGCTTCTTATCGGACGACGGTTGTGATGAATGCGCCGTATACGGCGGTGTATTTTGCGACTTATGAAGCTGCTAAAAGGGGATTGAAGGAGGTGTCACCGGGAAGTGATGACGATGAGAGGCTGATTGTTCATGCTACGGCCGGTGCGGCAGCTGGGTCTCTTGCTGCAGCTCTTACAACGCCATTAGACGTTGTGAAAACTCGGCTGCAGTGCCAGGGAGTATGTGGTTGCGACAAATTTTCAAGCAGTTCAATTGGGTACGTACTTGGGTGTGTGGTGAAGAAGGATGGCTACAATGGGTTGATGAAAGGATGGATTCCAAGGATGATGTTCCATGCCCCTGCTGCTGCAATCTGCTGGTCCACTTACGAGGCTTCCAAATCCTTCTTTCAACATCTCCACAATCACAACAATTAG 936 51.71 MATSVSHSPDFRPEVSVTPPNHDGLYFWQFMIAGSIAGSVEHMAMYPVDTLKTRIQALGGGSSTVRQALGSILKVEGPAGLYRGIGAMGLGAGPAHAVYFSVYEFAKEGFSMGNKNNPLAHAIAGVCATVTSDAVLTPMDVVKQRLQLKSSPYKGVGDCVKRILVEEGIGALYASYRTTVVMNAPYTAVYFATYEAAKRGLKEVSPGSDDDERLIVHATAGAAAGSLAAALTTPLDVVKTRLQCQGVCGCDKFSSSSIGYVLGCVVKKDGYNGLMKGWIPRMMFHAPAAAICWSTYEASKSFFQHLHNHNN* 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13949037 13950814 - Chy8G152170.1 Chy08g00612 232398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00612 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 109 IPR018108 -
Chy08g00612 311 PANTHER MITOFERRIN-LIKE 2 310 - -
Chy08g00612 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 302 IPR018108 -
Chy08g00612 311 PRINTS Mitochondrial carrier protein signature 131 149 IPR002067 GO:0055085
Chy08g00612 311 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Chy08g00612 311 PRINTS Mitochondrial carrier protein signature 30 43 IPR002067 GO:0055085
Chy08g00612 311 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Chy08g00612 311 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Chy08g00612 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 200 IPR018108 -
Chy08g00612 311 Pfam Mitochondrial carrier protein 213 304 IPR018108 -
Chy08g00612 311 Pfam Mitochondrial carrier protein 116 202 IPR018108 -
Chy08g00612 311 Pfam Mitochondrial carrier protein 26 111 IPR018108 -
Chy08g00612 311 SUPERFAMILY Mitochondrial carrier 23 297 IPR023395 -
Chy08g00612 311 PANTHER MITOFERRIN-1-RELATED 2 310 - -
Chy08g00612 311 Gene3D Mitochondrial carrier domain 11 149 IPR023395 -
Chy08g00612 311 Gene3D Mitochondrial carrier domain 150 311 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00612 Chy-Chr8:13949037 Chy11g01383 Chy-Chr11:20123077 2.41E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00612 K15113 - csv:101210464 612.838