Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00631 ATGGAAGATTTTTGCGATCTCCGCCGTGCTGTTTTTCATCGAATCGGCGTTAATGCGGAGGCGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACTGGAGACGAAGGAATTGCTTGCGATTAGAGCCGCGTTGGATAAGAATTTTTCGGAGATGAAACAGAATAGAATGCTTTGGATTTCGGTGGCCGAAAAGATGAAGGCTAAAGGCTTTAATCGAAGCGACGAGCAGTGTAAATGTAAATGGAAAAATCTCGTCACTCGTTATAAGGGTTGTGAAACTATGGATCCCAAAGCTCTAAAGCATCAATTTCCGTTTTACGACGACCTTCATACAATTTTTACTGCAAGGATGCAAAAGAATTGGTGGGTCGAAGCCGAAAACCGATCTGGAGGCTCGAAAAGGAGAGCAAACGAGGAACCCAATGGTGATAGAGAATTAGAAAACGAAGAAAAAACAAAAACGAAAAATGGCACAAAGAAGAGGAAATGGAAAAGGGATAATCCTGAAGAACATGAGATGAATTTGAAGGAAATATTGAAGAATTTTGTGAAAAGAGAGATGGAAATGGAGATGGAATGGAGAGAAGCATTTAGGGTTAGAGAAGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGAATGAAAATGGAAGGCATTGAGAGAGAGAAGATGATGATGGAGATTTTATGGAGAGAAAATGAGGAGAAAAGAAGAGAAAGAGAAGAAGCAAGAGCTCAGAAAACAGATGCTTTGATCTCTGCTTTGTTGACGAACCTCACGTAA 780 41.41 MEDFCDLRRAVFHRIGVNAEAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAEKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQKNWWVEAENRSGGSKRRANEEPNGDRELENEEKTKTKNGTKKRKWKRDNPEEHEMNLKEILKNFVKREMEMEMEWREAFRVREEERRLKEEEWRMKMEGIEREKMMMEILWRENEEKRREREEARAQKTDALISALLTNLT* 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14187749 14189880 - Chy8G152360.1 Chy08g00631 232417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00631 259 PANTHER - 1 259 - -
Chy08g00631 259 CDD GT1 29 92 - -
Chy08g00631 259 Coils Coil 225 252 - -
Chy08g00631 259 Gene3D - 29 90 - -
Chy08g00631 259 PANTHER - 1 259 - -
Chy08g00631 259 Pfam Myb/SANT-like DNA-binding domain 28 111 IPR044822 -
Chy08g00631 259 MobiDBLite consensus disorder prediction 125 168 - -
Chy08g00631 259 ProSiteProfiles Myb-like domain profile. 28 85 IPR001005 -
Chy08g00631 259 MobiDBLite consensus disorder prediction 128 168 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g02260 Chy08g00631 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01119 Chy-Chr7:16101870 Chy08g00631 Chy-Chr8:14187749 1.68E-19 dispersed
Chy04g02260 Chy-Chr4:27260336 Chy08g00631 Chy-Chr8:14187749 4.34E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18411 PF13837 Myb_DNA-bind_4 1.70E-18 CL0123 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00631 - - csv:101218250 459.144