Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00634 ATGGCTTCCCAAACAGAGCCTTGGCTAATGGAAAATGGAACCCTCAAGCGCCTAACCAAAGAGCATCGACATGGCCATGGTCGAACAGCTCATAACATGTCCTCCTCTTCCTTACGCAAAAAGTCCGATTTAACCCTCGTCTCCAAAATCCAATTCGGCTGTCTCCGTAAGTTTTGCATTAATCTTCAGGAGGTCATTTTGGGAACCAAACTTTCCATTCTCTTCCCCGCGATTCCTTTCGCTATTGTCGCTCAGAATTTTGGCTTTGGAAGACCTTGGATTTTTGCATTGAGCTTGCTTGGCCTTACGCCATTGGCTGAACGTGTCAGCTTCCTGACCGAGCAAATCGCTTATTTCACTGGTCCAACAGTTGGGGGGCTTTTGAATGCAACATGTGGAAATGCAACGGAGCTGATCATTGCAATATTAGCACTGACACAAAGAAAGATAGACGTGGTGAAGTATTCTCTATTGGGTTCTGTTCTTTCAAACCTTCTTCTTGTTCTTGGAACTTCTCTCTTTTGCGGTGGAATTGCTAATCTTAGACGGGAACAAAACTATGACAGAAGGCAAGCTGATGTCAACTCCCTCATGTTGATGCTATCTTTACTGTGCCACCTATTGCCGTTACTGTTTGGCTACGCTGCCGCCTCTGCCTCCACGGCCGCCACCTCGACCCTCCATCTGTCCAGAGCTAGCAGCATTGTAATGCTCACTGCTTACATTGCTTACTTGGTCTTTCAACTCTGGACTCATCGACAACTGTTTGAAGCTGAGGAAGATGAAGACGATGACGTTCCAGGAGAAGAGGCAGTGATCGGATTCTGGAGTGCATTTGCATGGCTTGTTGGAATGACACTCGTTATTGCTTTGCTTTCCGAGTACGTTGTCAACACAATTGAGGAAGCATCTACTACTTGGGGTTTGTCTGTGAGTTTCCTTAGCATAATCTTGCTCCCTATTGTTGGAAATGCCGCCGAACACGCGGGGGCTATCATATTTGCCTTCAAGAATAAGTTGGACATATCTTTGGGGGTTGCCCTGGGATCTGCAACACAAATTGCACTATTTGTGATTCCAATGTGTGTGATAGTAGCTTGGACAATGGGAGTGGACATGGACCTAAATTTCAACCTAATGGAAACAGGGTCACTTGGATTAGCAATTATTGCCACAGCCTTCACTTTACAAGATGGAACCTCTCATTATATTAAAGGCCTTGTTCTTCTTCTTTGCTACATTATCATTGCTGCTTGCTTCTTTGTTTCCAAGACACAAGAAGATAATAACAATGCTCCCAACTTGGGACTCCAATCTTCAAACCAAGCAATCTTCAGAGCTTAA 1344 44.94 MASQTEPWLMENGTLKRLTKEHRHGHGRTAHNMSSSSLRKKSDLTLVSKIQFGCLRKFCINLQEVILGTKLSILFPAIPFAIVAQNFGFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIAILALTQRKIDVVKYSLLGSVLSNLLLVLGTSLFCGGIANLRREQNYDRRQADVNSLMLMLSLLCHLLPLLFGYAAASASTAATSTLHLSRASSIVMLTAYIAYLVFQLWTHRQLFEAEEDEDDDVPGEEAVIGFWSAFAWLVGMTLVIALLSEYVVNTIEEASTTWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIALFVIPMCVIVAWTMGVDMDLNFNLMETGSLGLAIIATAFTLQDGTSHYIKGLVLLLCYIIIAACFFVSKTQEDNNNAPNLGLQSSNQAIFRA* 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14250594 14254855 + Chy8G152390.1 Chy08g00634 232420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00634 447 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 4 434 - -
Chy08g00634 447 Gene3D - 271 422 IPR044880 -
Chy08g00634 447 Gene3D - 122 270 IPR044880 -
Chy08g00634 447 TIGRFAM caca2: calcium/proton exchanger 58 421 - -
Chy08g00634 447 TIGRFAM cax: calcium/proton exchanger 76 421 IPR004798 GO:0006816|GO:0015369
Chy08g00634 447 Pfam Sodium/calcium exchanger protein 93 250 IPR004837 GO:0016021|GO:0055085
Chy08g00634 447 Pfam Sodium/calcium exchanger protein 278 419 IPR004837 GO:0016021|GO:0055085
Chy08g00634 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g02251 Chy08g00634 CCT
Chy04g02251 Chy08g00634 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00634 Chy-Chr8:14250594 Chy11g00737 Chy-Chr11:10002068 5.67E-105 dispersed
Chy12g00289 Chy-Chr12:3160759 Chy08g00634 Chy-Chr8:14250594 2.29E-07 transposed
Chy04g02251 Chy-Chr4:27196737 Chy08g00634 Chy-Chr8:14250594 7.31E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00634 K07300 - csv:101213857 811.601