Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00647 ATGGCCACCGCCGCCGCAACCTCCTCCTTCCTCGGTACACGCCTCGCCGAAATAGTCCCCAGTTCTGGCAGAGTCCAAGCCCGGTTCGGATTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGGGATTTCCGACCGGCCCCTGTGGTTTCCAGGAGCCAAGGCCCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCGTTTGGGTTGGGGAAACCGGCGGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCCAAGAATGTGGCCGGAGATATAATTGGGACAAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTATTTGGATTGCAGAGATTCCGTGAGTGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGTGTTACTTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCATCCTACCTAGGCCAACCACTTCCCTTCTCCATCACTACACTAATCTGGATCGAAGTTCTAGTGATCGGTTACATTGAGTTCCAAAGGAATGCGGAGCTGGACCCGGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTCTGGGGTTGGCTGAGGACCCAGAAAAGAAAGCAGTGCTACAATTGGCTGAGATCAAGCATGCTCGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTGACTGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTAA 855 52.28 MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS* 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14363437 14364580 - Chy8G152520.1 Chy08g00647 232433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00647 284 Pfam Chlorophyll A-B binding protein 59 255 IPR022796 -
Chy08g00647 284 MobiDBLite consensus disorder prediction 28 52 - -
Chy08g00647 284 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 2 284 - -
Chy08g00647 284 SUPERFAMILY Chlorophyll a-b binding protein 46 282 - -
Chy08g00647 284 Gene3D Chlorophyll a/b binding protein domain 53 284 - -
Chy08g00647 284 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 284 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00647 Chy-Chr8:14363437 Chy09g00695 Chy-Chr9:9241369 1.65E-48 dispersed
Chy08g00647 Chy-Chr8:14363437 Chy02g00166 Chy-Chr2:1171702 6.60E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00647 K08915 - csv:101208740 548.895