Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy08g00665 | ATGAATCTAGGTGCGGCGGAGGAAGAGTCGCCGCAAGAAATTCATATTCCGGCGAAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGTGTTGTTTTCAGGTGTTTCCGCTTTTCTTTACCCTATGGTTGTGTTGAAAACTCGTCAACAGGTTTCTCAGTCGCAACTTTCTTGCATCAGAACCGCATTTGGTCTTGTCTGCCATGAAGGTTTCCAAGCTCTTTATCGAGGATTTGGTACTTCTCTAATGGGAACTATCCCTGCTAGAGCTTTATACATGGGAGCTCTTGAGATACAACAATCTCAATTCTTCCTCAACTCATTAAATCAAAGGAATCGATGCGTTTTGAAAGATCCTCAACGCCTATGGCCTTCGTGGTCTCTACCGAGGACTTGGAATATTTATTTTGACCTACGCACCATCAAATGCCATGTGGTGGGCATCTTATTATGTGGTACAACGGCTGGTTTGAGTGGAATTGGGTACTGTTATCATGCAAAGAAGGTTCAGGTTGATGAAGATAATGAAAATGGAGGTTGTAGTAACAATGTCCACAAATCCGATTCCAAAACTATGATTGCGGTTCAGGGAGCAAGCGCTGCGATGGCAGGGTATCAGCTTTGA | 642 | 43.3 | MNLGAAEEESPQEIHIPAKIDWQMLDKSKFFFLGAVLFSGVSAFLYPMVVLKTRQQVSQSQLSCIRTAFGLVCHEGFQALYRGFGTSLMGTIPARALYMGALEIQQSQFFLNSLNQRNRCVLKDPQRLWPSWSLPRTWNIYFDLRTIKCHVVGILLCGTTAGLSGIGYCYHAKKVQVDEDNENGGCSNNVHKSDSKTMIAVQGASAAMAGYQL* | 214 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 14538425 | 14539209 | - | Chy8G152700.1 | Chy08g00665 | 232451 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy08g00665 | 213 | Pfam | Mitochondrial carrier protein | 37 | 107 | IPR018108 | - | |
| Chy08g00665 | 213 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 108 | - | - | |
| Chy08g00665 | 213 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
| Chy08g00665 | 213 | Gene3D | Mitochondrial carrier domain | 19 | 210 | IPR023395 | - | |
| Chy08g00665 | 213 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN | 1 | 108 | - | - | |
| Chy08g00665 | 213 | SUPERFAMILY | Mitochondrial carrier | 23 | 111 | IPR023395 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy07g00267 | Chy-Chr7:2105148 | Chy08g00665 | Chy-Chr8:14538425 | 9.74E-49 | dispersed | |
| Chy08g00665 | Chy-Chr8:14538425 | Chy09g00188 | Chy-Chr9:1629821 | 2.28E-19 | dispersed | |
| Chy08g00665 | Chy-Chr8:14538425 | Chy01g02185 | Chy-Chr1:26400850 | 9.69E-22 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy08g00665 | K15121 | - | csv:101210602 | 194.512 |