Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00682 ATGGCGATGGGGGAAGAAGTGGAATTGTTTGGTGGATGGATGAGTCCATTTAGCCGGAGAGTGGAGTTGGGTTTGAAACTCAAAGGCATTGATTATAAATATAATGAAGAAGATTTGAAGAACAAAAGTGATTTCCTTTTGACTTACAACCCAATTTACAAGAAAGTCCCTGTTTTTCTTCACAACGGAAACCCCATTTCAGAGTCACTTATAATTCTTGAGTACATCGATCAAGTTTGGAACTCACTTTATCCTTTCTTTCCTCAACAAAATCCCTACGAAACAGCTCAAGCAAGATTCTGGGCTAAGTATATAGATGACAAGGTTTTTGCTGCTATACTGAAGGCTGCAAAAAGCAGCAAAAGAGAAGAGAGAGAGAAGGGTTTGGAAGAAACAGAGGAGACATTAAAACCACTTGAGAAAGAGCTTCAAAACAAGAAGTTCTTTGGAGGAAATAAAATTGGAATTGTGGACATTGTTGGAACTGTAATTGCATATTGGATTCCAGCCATTGAAGAAGGTTTTGGATTTGAGCTGTTGACAACTAAAAAGTTTCCAAAGTTAACCAAATGGAGTGAAGAGATTGTAAACAACAGTGTAGTCAAGCAGGTGTTGCCTCCAAAATCTATCCTTGTGGCCTACCTGCAAGTTGTTTTAACGGTCAACTAG 669 38.57 MAMGEEVELFGGWMSPFSRRVELGLKLKGIDYKYNEEDLKNKSDFLLTYNPIYKKVPVFLHNGNPISESLIILEYIDQVWNSLYPFFPQQNPYETAQARFWAKYIDDKVFAAILKAAKSSKREEREKGLEETEETLKPLEKELQNKKFFGGNKIGIVDIVGTVIAYWIPAIEEGFGFELLTTKKFPKLTKWSEEIVNNSVVKQVLPPKSILVAYLQVVLTVN* 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14670071 14670843 + Chy8G152870.1 Chy08g00682 232468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00682 222 SFLD Main.3: Omega- and Tau-like 3 216 IPR045073 -
Chy08g00682 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Chy08g00682 222 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Chy08g00682 222 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Chy08g00682 222 Coils Coil 122 142 - -
Chy08g00682 222 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Chy08g00682 222 Gene3D - 91 221 - -
Chy08g00682 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 217 - -
Chy08g00682 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 217 IPR045073 -
Chy08g00682 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Chy08g00682 222 Pfam Glutathione S-transferase, C-terminal domain 105 197 IPR004046 -
Chy08g00682 222 CDD GST_N_Tau 7 80 - -
Chy08g00682 222 Gene3D Glutaredoxin 3 89 - -
Chy08g00682 222 SFLD Glutathione Transferase (cytosolic) 3 216 IPR040079 -
Chy08g00682 222 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00682 Chy-Chr8:14670071 Chy08g00694 Chy-Chr8:14761872 3.54E-92 dispersed
Chy08g00682 Chy-Chr8:14670071 Chy08g00683 Chy-Chr8:14675818 4.24E-98 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00682 K00799 - csv:101214992 388.652