Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00690 ATGGCAGACCAAGTACAAGTGTTGGGTTTTTGGGGAAGTCCTTTTAGTCGCAGAGTGGAGCTAGCTCTCAAACTCAAAGGCGTAGAATACCAATACTTTGAAGAAGATTTGCCCCACAACAAGAGTGATTTGCTTCTCAAATACAACCCAATTCACAAGAAGGTCCCTGTTCTGCTCCACCATGGTCAACCCATTGCTGAGTCTCTTGTGATTCTGGAATACATTGATGATATCTGGAAAAAAAACTATCCCATCTTGCCCCAACATCCCCACCAAAGAGCTCTTGCCAGATTCTGGGCTAAGTTTATTGACGACAAGGTCGTGGTTGCAGTAGTGAAGGCTGCTGGAAGCAGAGGAGAAGATAGAGAGAAGGCTATAGAAGAGGCAAGGGAAGCATTAGAAGCACTTGAGAAAGAGATTGAAAAAAACAATGAACTGTTTGGAGGAGATGATATTGGGTTTGTGGACATTGTTGGGACTGTGATTGCTGGTTGGGTTCCTGCCATTGAAGAATGTTTTGAGTTTCAGCTGCTTACAACTGATAACTTCCCTAACTTGATCAAATGGAGTGATCAGCTTGTTAACCATTCCATTGTCAACCAGATTCTCCCTGCTAAAAATGAGATTGTTGCCTTTATGAAAGCTAATTGGAAATTTTGA 660 42.42 MADQVQVLGFWGSPFSRRVELALKLKGVEYQYFEEDLPHNKSDLLLKYNPIHKKVPVLLHHGQPIAESLVILEYIDDIWKKNYPILPQHPHQRALARFWAKFIDDKVVVAVVKAAGSRGEDREKAIEEAREALEALEKEIEKNNELFGGDDIGFVDIVGTVIAGWVPAIEECFEFQLLTTDNFPNLIKWSDQLVNHSIVNQILPAKNEIVAFMKANWKF* 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14731874 14732671 + Chy8G152950.1 Chy08g00690 232476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00690 219 Gene3D Glutaredoxin 1 85 - -
Chy08g00690 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Chy08g00690 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Chy08g00690 219 SFLD Main (cytGST) 2 215 - -
Chy08g00690 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 3 217 - -
Chy08g00690 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Chy08g00690 219 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Chy08g00690 219 Gene3D - 86 219 - -
Chy08g00690 219 Coils Coil 119 146 - -
Chy08g00690 219 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Chy08g00690 219 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Chy08g00690 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 217 IPR045073 -
Chy08g00690 219 SUPERFAMILY GST C-terminal domain-like 78 217 IPR036282 -
Chy08g00690 219 CDD GST_N_Tau 5 79 - -
Chy08g00690 219 Pfam Glutathione S-transferase, C-terminal domain 106 195 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00684 Chy-Chr8:14680387 Chy08g00690 Chy-Chr8:14731874 2.86E-64 dispersed
Chy08g00685 Chy-Chr8:14682160 Chy08g00690 Chy-Chr8:14731874 5.65E-77 dispersed
Chy08g00690 Chy-Chr8:14731874 Chy08g00694 Chy-Chr8:14761872 3.30E-94 dispersed
Chy12g01546 Chy-Chr12:19136634 Chy08g00690 Chy-Chr8:14731874 5.59E-56 dispersed
Chy08g00690 Chy-Chr8:14731874 Chy08g00692 Chy-Chr8:14742645 1.13E-95 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00690 K00799 - csv:105435246 365.925