Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00693 ATGGCCGGAGGAGAGGAAGTGAAAGTGTTTGGTTTCCGCTCAGGTTCGTATAGTCGGAGAGTGGAGTTAGCTTTTAAACTCAAAGGCGTCGATTATGAACACATTGACGAAGATTTGCTTAACAACAATAAGAGCGATTTGTTGCTGAAATACAACCCAATTTACCAGAAAGTGCCCGTTCTTGTCCACAATGGAAAACCCATTTCAGAGTCTCGTGTAATCCTTGAATACATCGACGAAACTTGGACCCAAAATTATGCCATCTTGCCTACAGATCCCTATGAAAGAGCTCTTGCAAGATTCTGGGCTAAGTATATTGATGAAAAGGTTGTGCCTGCGATAGAGAAAGCTTTTAGAAGCAATGAAGAAGAAAGAGAGAAGAGAATAGAAGAAGCTCAAGAGATGCTAGAACCACTTGAGAAAGAGCTTCAAAACAAGTTATTCTTTGGAGGAGACAAAATTGGATTTGTTGACATTGTAGGTCTGGTTATACCAGGGTGGATGCATGCCAGTCAAGAAGCTGCAGGCTTTGAAGTTCTAACAATTCACAAATTTCCAAACCTAAACAGATGGATTCAAGATTATTTGAACCACAGCGTTGCAAAGGAAGTTCTACCGCAAAAGGATTTTCTTGTTGCATTTTTGAGCAAAGTTGTGTTTGGTCGAAATAACTAG 675 40.3 MAGGEEVKVFGFRSGSYSRRVELAFKLKGVDYEHIDEDLLNNNKSDLLLKYNPIYQKVPVLVHNGKPISESRVILEYIDETWTQNYAILPTDPYERALARFWAKYIDEKVVPAIEKAFRSNEEEREKRIEEAQEMLEPLEKELQNKLFFGGDKIGFVDIVGLVIPGWMHASQEAAGFEVLTIHKFPNLNRWIQDYLNHSVAKEVLPQKDFLVAFLSKVVFGRNN* 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14757060 14758324 - Chy8G152980.1 Chy08g00693 232479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00693 224 Pfam Glutathione S-transferase, N-terminal domain 6 80 IPR004045 -
Chy08g00693 224 Pfam Glutathione S-transferase, C-terminal domain 101 196 IPR004046 -
Chy08g00693 224 CDD GST_N_Tau 7 82 - -
Chy08g00693 224 PANTHER GLUTATHIONE S-TRANSFERASE U8 5 215 - -
Chy08g00693 224 Coils Coil 122 142 - -
Chy08g00693 224 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Chy08g00693 224 SUPERFAMILY GST C-terminal domain-like 80 217 IPR036282 -
Chy08g00693 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 215 IPR010987 -
Chy08g00693 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Chy08g00693 224 SFLD Main.3: Omega- and Tau-like 5 217 IPR045073 -
Chy08g00693 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 -
Chy08g00693 224 Gene3D - 92 220 - -
Chy08g00693 224 CDD GST_C_Tau 93 217 IPR045074 GO:0004364|GO:0006749
Chy08g00693 224 Gene3D Glutaredoxin 1 91 - -
Chy08g00693 224 SFLD Glutathione Transferase (cytosolic) 5 217 IPR040079 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00693 Chy-Chr8:14757060 Chy08g00695 Chy-Chr8:14774119 7.92E-86 dispersed
Chy08g00692 Chy-Chr8:14742645 Chy08g00693 Chy-Chr8:14757060 1.71E-115 tandem
Chy08g00693 Chy-Chr8:14757060 Chy08g00694 Chy-Chr8:14761872 2.67E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00693 K00799 - csv:101220464 432.95