Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00703 ATGGCGGAGGGTTTTGAAGTTTACGGCCATGTCCCACAACAAAGCCGGAGAGACAAGCTTAGAATTGGAATTGCTCAGCAACTCCTCCATGATTTATTTGATTACGCCGCCCCTAACATCTCCGACGACAAGCTCCTGCTGGATTCCACCGTTTTTGACTCCTTGGAAGGTGATATTCCCACCGCCCCCGCGGCTGATGAAACCCACAGCACAAAATCTAGGCTTATTACCATGCTTCACGAGGTCTATAGAAGATATAAGCTATACTATCAGCAAATGCAAGCAGTGGTTACAACATTTGAGTACGCTGCAGGGCTTGGGAATGCAGCTCCCTATGCAAACTTAGCCATAAAAGCCATGTTTAAGCACTTCAGATTCTTAAAAAATGCCATAGCCGACCAGCTCCAATTCAACAAGCAGCAGCAGCAGCAACCAAACCCTTATTCTCAAAGATCTATTCACAACCACGGTCCCGGATTTCTTGATCACCAACCCGTCTGGCGCCCGCAGAGAGGCCTCCCCGAGAGCGCCGTCACCATCCTCCGAGCTTGGCTCTTTGAGCACTTCCTTCATCCTTATCCTACGGATACAGATAAGCTCATGTTGGCCAACCAGACTGGACTCTCGAGAAGTCAGGTATCAAACTGGTTCATCAATGCAAGAGTGAGACTTTGGAAACCAATGGTTGAAGAAATCCATATGTTAGAAACAAGGCAAGCTCAAAAATCTCAGCAAAAGGAAGACAAGAACAACAATAACAATAATATTGAAAATAATAGTGCCTTAAACAACATCAACAACAACGATCCTCTTTCCTCCACAAATGAGTCCTTACTAAAACCTCACCACAACAATAATGCATCTTCTTCAAACCACCACCACCATCCTTCTCTAGATTTGTCCAACACCAATTTCTTTCCCACCCACCACCCTCATGCCGCCACCGGCAACATTTCCTTAACTCTCGGCCTCCACCAGAACCACCCTAGCGGTATCGCTCTCACGGAGCCATTTCCCATCAATGCAGCTCACCATTTTAACGTTGGCTTAGAAGCCAACGGTGAAGGGTTTGTAAATGAGTGGTTTTGA 1089 46.46 MAEGFEVYGHVPQQSRRDKLRIGIAQQLLHDLFDYAAPNISDDKLLLDSTVFDSLEGDIPTAPAADETHSTKSRLITMLHEVYRRYKLYYQQMQAVVTTFEYAAGLGNAAPYANLAIKAMFKHFRFLKNAIADQLQFNKQQQQQPNPYSQRSIHNHGPGFLDHQPVWRPQRGLPESAVTILRAWLFEHFLHPYPTDTDKLMLANQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAQKSQQKEDKNNNNNNIENNSALNNINNNDPLSSTNESLLKPHHNNNASSSNHHHHPSLDLSNTNFFPTHHPHAATGNISLTLGLHQNHPSGIALTEPFPINAAHHFNVGLEANGEGFVNEWF* 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14879184 14883612 + Chy8G153080.1 Chy08g00703 232489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00703 362 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 9 25 342 - -
Chy08g00703 362 MobiDBLite consensus disorder prediction 138 153 - -
Chy08g00703 362 SUPERFAMILY Homeodomain-like 169 234 IPR009057 -
Chy08g00703 362 Coils Coil 239 259 - -
Chy08g00703 362 Gene3D - 170 232 - -
Chy08g00703 362 CDD homeodomain 167 228 IPR001356 GO:0003677
Chy08g00703 362 SMART HOX_1 167 231 IPR001356 GO:0003677
Chy08g00703 362 MobiDBLite consensus disorder prediction 138 166 - -
Chy08g00703 362 MobiDBLite consensus disorder prediction 238 310 - -
Chy08g00703 362 Pfam Associated with HOX 65 132 IPR006563 -
Chy08g00703 362 ProSiteProfiles 'Homeobox' domain profile. 164 227 IPR001356 GO:0003677
Chy08g00703 362 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 25 342 - -
Chy08g00703 362 MobiDBLite consensus disorder prediction 246 310 - -
Chy08g00703 362 SMART prehox3 22 133 IPR006563 -
Chy08g00703 362 Pfam Homeobox KN domain 184 223 IPR008422 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g02186 Chy08g00703 CCT
Chy04g02186 Chy08g00703 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00703 Chy-Chr8:14879184 Chy12g00801 Chy-Chr12:12810356 4.01E-68 dispersed
Chy04g02186 Chy-Chr4:26875456 Chy08g00703 Chy-Chr8:14879184 1.05E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18416 PF07526 POX 1.70E-25 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00703 - - csv:101221147 612.838