Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00732 ATGGCATCTTCTTCTTTTTTGTTCATCATTTTTTTCTTGTCTCTAATTTTTCTCTCCACACATACCTTATCTTCTCACTACACCCAACTCTTCTACCCTGGTTTCAATGTATCCATCGACATAACTTTGAAAGAATCTGCAGATATTGAAAGCAATGGAGTTTTGAGGCTAACCAGTCGTAATTCCCGAAACAACATCGGCCAGGCCTTTTACTCCTCTCCAATCCAGTTCAAAAACTCCTCCAGCGACGGTGGCCGTGGACCCTTTTCTTTCTCCACTTGTTTTGTCTTCTGCATCATCCCCGAGAACGAGGGCGGCCATGGATTTACTTTCGCCATTGTCCCTTCTAAAGATCTCAAAGGTATTTCTCAGAGGTTTCTTGGACTCTTCAACGAATCCAATTTCTATGGGATATTTTCAAATCACATCTTCGCTGTGGAATTCGATACAATCTTCGATGTTGGGATCAAAGATATAGATAACGATCATGTGGGGATTGATTTAAACAGCTTGATTTCGAATGCCACTGTTCACGCTGCTTATTTTGACGAATTGGGTAAAGTTCATAATCTCTCACTTCAAAGTGGGAAGCCGATTAAAGTTTGGATTGATTATGATTCTGATGAAATCATTCTCAATGTTACGATTTCCCCTTTTAATTCAAAACCCAGAAACCCAATTCTGTCTTACAGAGTGGATCTTTCATCGGTTTTTTATGAAGAAATGTACATTGGATTTACTGCATCAACAGGCTTACTTTCTAGAAGCTCGCAGTACATTTTAGGTTGGAGTTTCGCCATTAATGGCCAAGCTCGAGATCTTGATATCTCTTCACTTCCTTTACCCAAAAAGATGAAAACAAGGGAGAAAATCAGAAAATCGACGACGAGCTCCGATGTATACGCGTTTGGGGCTTTAATGCTGGAAGTGGCATGTGGGCGGCGGCCGGTGGAGGTGAAGGCGTTGCCGGAGGAGATGACGTTGGTGGATTGGATTTGGGATAAATACAGAGAAGGGCAGGTTTTGTCGGTCGTGGATTCGAAGCTCCAGGGAGTTTACGACGAGGTAGAGGTGACGATGGTCTTGAAATTGGGGGTAATGTGTTCGAATAATGTGCCGGATCAAAGGCCGAGTATGAAGCAGGTAGTGCGGTGTTTGGACGGAGAAATTGGCGTCGTCGATGAATGGAAGTCCCCCGGCGGCGGAAGTAAGGGCGGTGCGGTGGGGGATTTTCTTGGGTCATTTACGTCCACGTCCATTAGTGGAGAAAGCTCCGGTTAA 1281 44.11 MASSSFLFIIFFLSLIFLSTHTLSSHYTQLFYPGFNVSIDITLKESADIESNGVLRLTSRNSRNNIGQAFYSSPIQFKNSSSDGGRGPFSFSTCFVFCIIPENEGGHGFTFAIVPSKDLKGISQRFLGLFNESNFYGIFSNHIFAVEFDTIFDVGIKDIDNDHVGIDLNSLISNATVHAAYFDELGKVHNLSLQSGKPIKVWIDYDSDEIILNVTISPFNSKPRNPILSYRVDLSSVFYEEMYIGFTASTGLLSRSSQYILGWSFAINGQARDLDISSLPLPKKMKTREKIRKSTTSSDVYAFGALMLEVACGRRPVEVKALPEEMTLVDWIWDKYREGQVLSVVDSKLQGVYDEVEVTMVLKLGVMCSNNVPDQRPSMKQVVRCLDGEIGVVDEWKSPGGGSKGGAVGDFLGSFTSTSISGESSG* 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15093249 15095231 - Chy8G153370.1 Chy08g00732 232518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00732 426 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 283 IPR013320 -
Chy08g00732 426 SUPERFAMILY Protein kinase-like (PK-like) 293 384 IPR011009 -
Chy08g00732 426 PANTHER - 10 285 - -
Chy08g00732 426 Pfam Protein tyrosine and serine/threonine kinase 292 386 IPR001245 GO:0004672|GO:0006468
Chy08g00732 426 Pfam Legume lectin domain 30 279 IPR001220 GO:0030246
Chy08g00732 426 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 10 285 - -
Chy08g00732 426 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 290 400 - -
Chy08g00732 426 CDD lectin_legume_LecRK_Arcelin_ConA 28 269 IPR001220 GO:0030246
Chy08g00732 426 Gene3D Transferase(Phosphotransferase) domain 1 282 395 - -
Chy08g00732 426 PANTHER - 290 400 - -
Chy08g00732 426 Gene3D - 28 276 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g02166 Chy08g00732 CCT
Chy04g02166 Chy08g00732 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00732 Chy-Chr8:15093249 Chy04g02167 Chy-Chr4:26764412 2.23E-43 dispersed
Chy08g00732 Chy-Chr8:15093249 Chy08g00734 Chy-Chr8:15111259 9.78E-88 proximal
Chy02g02613 Chy-Chr2:29309257 Chy08g00732 Chy-Chr8:15093249 9.64E-54 transposed
Chy03g00544 Chy-Chr3:7656342 Chy08g00732 Chy-Chr8:15093249 8.36E-09 transposed
Chy08g00669 Chy-Chr8:14563446 Chy08g00732 Chy-Chr8:15093249 3.87E-16 transposed
Chy04g02165 Chy-Chr4:26757558 Chy08g00732 Chy-Chr8:15093249 6.93E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71438 PF00139 Lectin_legB 2.20E-70 CL0004 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00732 - - csv:101205197 534.643