Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00754 ATGGGTAATCGTATTGGAAAGATTGGCCACTGTTTCGCCGGCGCCGGCGATATCTCCAGGCGTTATGATCCCGCCGACATTATCTCCGACCCCCACGATGGGGGTTTCGGTCATTCCTTCTACTACTTACCACCCGACCCACATATTCTCTCGTCATCCAAAGGTTTTTCCGACGTCTACATATCTCCGGTGACCGTTTTCCGGTCGATTTCCGGCGCCTCCGTCAGTGCCAACGTCTCAACGCCGCTCTCCACTTCTCTTGTTGATCTTTATCCTTACAGCACCACGTTTGATAGGGCTGCAGCTTTTGATTGCACGAATTCCTTCGCCTCTGTGCCGTTGCAGCCGGTGCCTCGCCACTCGGTGTCGGGAAATTCTGGTGGATTTCCTTTTTCAGGTCCGATGGAGAGAGGGTTTTTATCTGGACCTTTGGCTGCGAGGAGCTTTGAATCGGGTCCGATTGATCGAGTGGTTCATTCCGGTCCAGTTGAGAAGGACGGCGGACCGGAGAAATTGCAAAGGAGCGTTTCTCAGGGCGGGGTTGGAGACAGAGAACCGAAATTGAAAAAAAGAAGAAGAAGAAGAAATCTTATTCGGATTCTGAAGAGAGCCATATCCAAAACCATCTCTCGAAACAAGCATAATGAAAATGGCGCAGCTTCTGCTGGTCAGACTCAGAGCAGTGTCCATTTGAGCAGCCATGGGAGCTTGGCGCAGGAAGACGATGGCGATTACTTTCTCGGAGGTCAGAGTGTGCAGTGGGCGCAGGGGAAGGCCGGTGAGGATAGAGTTCACGTGGTGATATCAGAGGATAATGGTTGGGTTTTTGTCGGAATTTATGATGGATTCAACGGCCCTGATGCTCCTGATTACTTGCTTGCTAATCTCTACACCGCTGTTCTTAAAGAGCTCAAGAGTGGTTTGATTTGGAATGATAAGTTCGATTCAACTGCAACTTCATCTTCCATGAACTCATCGAATTCTGCTTCAACTGAGGAAGACGATCATAGAACAAACCACATGAAAAATCAAGAGAGTGATCATCAATCTACAGAGAATATCTTACCCGAAAATGATGTTGTGAATTTGGAGGCTGATTTGGTGAGGAAAAGAGAGAGAGTTCACAATACGAATTATAGGACGAGTCAGCTGATGAAGAAGGCCGATCAGAATCCAAAGAACTGGAAATGTGAATGGGAAAGGGAAAGATTAGGATTAGAGGGTAAGTTGAACAATAATAGACAAATAGATCACCACCAAATATGGGATGAATCAACAGCAATCAATCATTCTGAGGTGTTGAATGCTCTGTCTCAAGCATTGAGAAAAACAGAGGAAGCATATCTGCAAAATGCAGACAAGATGGTCACAAGAAATCCTGAGCTAGCTCTAATGGGTTCTTGTGTTTTGGTGATGTTGATGAGAGGAGAAGATGTCTACTTGATGAATGTAGGAGATAGCCGTGCTATTGTAGCGCAGCAATTCGAACCGGATTTCGGGACTGGAAAACCATACAGAGACTTGGAGAGAATCAATGAAGGAACAATGCAAGTATTTGAATCCTCTAATGGAGTAGAGTTTGAAAAATTAAAAACATTGGCTTCCCATCAGCTTACAATGGACCACAGCACTTACACAGAGGAGGAAGTTCAGAGGATCAAGAATGCTCATCCTGACGACGCTTCCGCAATTATGAATGACAGGGTGAAAGGTTATTTGAAGATCACGCGAGCGTTCGGAGCTGGCTTTCTGAAGCAGCCAAAGTGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTACGTGGGAAATTCACCTTACATCACCTGTGATCCAACTCTATGCCATTATAAACTCAGCCCAACAGACAGATTCTTGATATTGTCCTCTGATGGACTCTACCAGTACTTTACCAATGAAGAAGCTGTTGCTCAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGATCCTGCTCAAAATCTAATTGAAGAAGTATTGTTCCGAGCAGCTAAAAAATACGGAATGGACTTCCATGAACTGCTTGATATCCCACAAGGGGAGCGACGGAAGTTCCATGATGACGTTTCGGTAATCATCATTTCATTTGAAGGAAGAATGTGGCATTCGTTGATGTAA 2139 45.3 MGNRIGKIGHCFAGAGDISRRYDPADIISDPHDGGFGHSFYYLPPDPHILSSSKGFSDVYISPVTVFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCTNSFASVPLQPVPRHSVSGNSGGFPFSGPMERGFLSGPLAARSFESGPIDRVVHSGPVEKDGGPEKLQRSVSQGGVGDREPKLKKRRRRRNLIRILKRAISKTISRNKHNENGAASAGQTQSSVHLSSHGSLAQEDDGDYFLGGQSVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYTAVLKELKSGLIWNDKFDSTATSSSMNSSNSASTEEDDHRTNHMKNQESDHQSTENILPENDVVNLEADLVRKRERVHNTNYRTSQLMKKADQNPKNWKCEWERERLGLEGKLNNNRQIDHHQIWDESTAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQFEPDFGTGKPYRDLERINEGTMQVFESSNGVEFEKLKTLASHQLTMDHSTYTEEEVQRIKNAHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYFTNEEAVAQVESFIASFPEGDPAQNLIEEVLFRAAKKYGMDFHELLDIPQGERRKFHDDVSVIIISFEGRMWHSLM* 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15251821 15254338 + Chy8G153590.1 Chy08g00754 232540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00754 712 MobiDBLite consensus disorder prediction 209 235 - -
Chy08g00754 712 SMART PP2C_4 235 701 IPR001932 -
Chy08g00754 712 MobiDBLite consensus disorder prediction 316 351 - -
Chy08g00754 712 ProSiteProfiles PPM-type phosphatase domain profile. 246 703 IPR001932 -
Chy08g00754 712 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 20 710 - -
Chy08g00754 712 MobiDBLite consensus disorder prediction 211 235 - -
Chy08g00754 712 MobiDBLite consensus disorder prediction 155 193 - -
Chy08g00754 712 Pfam Protein phosphatase 2C 414 675 IPR001932 -
Chy08g00754 712 SUPERFAMILY PP2C-like 257 705 IPR036457 -
Chy08g00754 712 MobiDBLite consensus disorder prediction 330 347 - -
Chy08g00754 712 CDD PP2Cc 422 703 IPR001932 -
Chy08g00754 712 Gene3D - 214 709 IPR036457 -
Chy08g00754 712 PANTHER PROTEIN PHOSPHATASE 2C 20 710 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02129 Chy-Chr6:25615092 Chy08g00754 Chy-Chr8:15251821 3.06E-39 dispersed
Chy08g00754 Chy-Chr8:15251821 Chy02g00538 Chy-Chr2:3239014 2.80E-38 dispersed
Chy06g00699 Chy-Chr6:4771728 Chy08g00754 Chy-Chr8:15251821 2.63E-14 transposed
Chy11g01233 Chy-Chr11:18459664 Chy08g00754 Chy-Chr8:15251821 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00754 - - csv:101213757 1399.42