Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy08g00779 | ATGAATCCCCAAGTTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTAGTGTTCTTGCAGTTTGGTCTTGCAGGAATGGACATTCTATCTAAAGCAGCTCTGAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCACTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAATTCCAGTCTTTGCCAAGTTAATGGTCCTCAGCTTGCTAGAGCCTGTGATTGATCAAAACTTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTTCCTGCCATTACCTTTGTAATGGCTTGGATTCTCAGGCTTGAGAAAGTAAGAATCAAAACAATCAGAAGCCAAGCTAAGATAGTGGGAACCGTAGCAACAGTCGGAGGAGCTATGATAATGACACTAATGAAAGGTCCAATTTTAGAGCTATTTTGGGTTAAAGAAAGAGCAAACAACCCACAACAAAGAGGTGAAATCAGCCTTCAACATACAATCAAAGGTTCGATTATGATCACAATTGGTTGCTTCAGCTGGGCCTGTTTCATGATTCTTCAGGCAATAACATTGAAAGCTTACCCAGCTGAGCTTTCTCTTACGGCATGGATTTGCTTATTGGGAACGGCGGAGGGAACTGTGGTGGCTTTGGTCATGGAAAGAGGAAACCCCGCCGTTTGGTCCATTACTTGGGGAACTAAATTACTCGCCGCCGTTTATAGTGGGATATTCTGTTCGGGACTTGCTTATTACATTCAAGGACTAGTGATGAAAGACAAAGGGCCTGTTTTTGTCACTGCCTTTAGTCCTTTGAGTATGGTCATTGTAGCCATCATGAGTTCCTTTATTCTAGGCGAACGTCTTTACTTTGGAAGGGTACTTGGAGCAGCTGTGATAATTGTGGGACTATACCTTGTTGTTTGGGGCAAAAACAAAGATGAGAATTGTTCCTCAAATGAAGACTTGAAATTGCCCACAAAACAAATAATGGAAGACAACAAGACGATGGAAAGTTTAACAATTGAACCAAATAGTTGTATTGATTTAAAGAATAATATGGAGCAAAAATGA | 1128 | 40.96 | MNPQVSQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLMVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVRIKTIRSQAKIVGTVATVGGAMIMTLMKGPILELFWVKERANNPQQRGEISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVVALVMERGNPAVWSITWGTKLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAAVIIVGLYLVVWGKNKDENCSSNEDLKLPTKQIMEDNKTMESLTIEPNSCIDLKNNMEQK* | 376 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 15468048 | 15470418 | + | Chy8G153840.1 | Chy08g00779 | 232565 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy08g00779 | 375 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 245 | 331 | - | - | |
| Chy08g00779 | 375 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 48 | 155 | - | - | |
| Chy08g00779 | 375 | PANTHER | WAT1-RELATED PROTEIN | 9 | 346 | - | - | |
| Chy08g00779 | 375 | PANTHER | WAT1-RELATED PROTEIN | 9 | 346 | IPR030184 | GO:0016021|GO:0022857 | |
| Chy08g00779 | 375 | Pfam | EamA-like transporter family | 187 | 326 | IPR000620 | GO:0016020|GO:0016021 | |
| Chy08g00779 | 375 | Pfam | EamA-like transporter family | 23 | 135 | IPR000620 | GO:0016020|GO:0016021 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy06g02058 | Chy-Chr6:24761629 | Chy08g00779 | Chy-Chr8:15468048 | 1.31E-39 | dispersed | |
| Chy07g00601 | Chy-Chr7:5355064 | Chy08g00779 | Chy-Chr8:15468048 | 5.89E-47 | dispersed | |
| Chy08g00779 | Chy-Chr8:15468048 | Chy10g00555 | Chy-Chr10:12201738 | 2.41E-143 | dispersed | |
| Chy03g00876 | Chy-Chr3:12027949 | Chy08g00779 | Chy-Chr8:15468048 | 2.69E-121 | transposed | |
| Chy05g00334 | Chy-Chr5:3448147 | Chy08g00779 | Chy-Chr8:15468048 | 5.49E-83 | transposed | |
| Chy07g00654 | Chy-Chr7:6254589 | Chy08g00779 | Chy-Chr8:15468048 | 5.85E-131 | transposed | |
| Chy08g00232 | Chy-Chr8:5223604 | Chy08g00779 | Chy-Chr8:15468048 | 1.28E-118 | transposed | |
| Chy10g00710 | Chy-Chr10:13443093 | Chy08g00779 | Chy-Chr8:15468048 | 1.99E-106 | transposed | |
| Chy10g00554 | Chy-Chr10:12185618 | Chy08g00779 | Chy-Chr8:15468048 | 1.12E-139 | wgd | |
| Chy08g00779 | Chy-Chr8:15468048 | Chy09g00760 | Chy-Chr9:10057546 | 1.27E-136 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy08g00779 | - | - | csv:101217902 | 729.554 |