Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00806 ATGAGTGCTCATGCCGGCAGGCTGAGAGAGTTAAGAGAAACAAGTCATCACGCGCATGATGGTAATGGAAGCGTGAATAATGGGGTATCTGGCAGGGAACAGAGCCCGATTGAGGAAAATGAGTTGAAAGTCAATGGGTTAACTAGAAATACAGAGGATGGTCGAAAATCCACTGTCCATGCACAGGACATTCTGCAAATACAACAGCAACAGCAGCCTCAAGGATCTATGGTCTGCTGGGAGAGATTTCTACATCTTAGGTCTCTCAAGGTTCTGCTTGTTGAAAATGACGACTCAACTCGCCATTTAGTCACTGCACTGCTTCGTAATTGCAGTTATGAAGTAATTGCGGCTGCAAATGGACTACACGCATGGAAGATGCTTGAAGATCTGACAAATCACATAGATCTCGTCCTAACAGAGGTGGTCATGCCCTGCTTATCTGGCATTGGTCTTTTATGCAAGATTATGAACCATAAAACGAGGAAGAATATACCTGTAATCATGATGTCTTCTCATGATTCAATGGGTTTAGTCTTTAAATGTTTGTCAAAGGGTGCTGTTGATTTTTTAGTGAAGCCCATTCGGAAGAATGAGCTTAAAAACCTTTGGCAACATGTTTGGAGAAGATGCCATAGCTCTAGCGGCAGTGGAAGTGAGAGTGGCACACAGACCCAAAAATCTGTGAAGTCAAAAAGTGTTGAAAAATCAGACAACAACACTGGAAGTAACGATGATGAAGAAGAAGACAACGAGAGCATTGGTTTCAATATTGCTGATGGGAGTGATGATGGTAGTGGCACACAGAGTTCTTGGACTAAGCAAGCTATAGAAGTTGAAAGCCCTCGACCGGTATCTGCATCAGCATGGGATCATAAACGTGAACGTCCTGATAGTACTTGTGCCCAAGTTGTCCACTCAAATGCTGATGCATTTGCCAATAATGCAGCAATTATTTTGACAGCAGGGTGCCAGGTGCAGAAAAAGCAACTGGAAACTGCTACCTTGGCTAAAGTTGAATTAGGCATGCACAGAAATCTAGATTTACAACTTGAACTCTCTACGGAGCATCCAACCAAGTTAGTTAATAGGAAACAGAACATCAGGCTTGAGATTGGGTCTAGTGGATTCAATGAGCAGTTCAACAAAGGACATCTGGACCTCAACTCTGAGAGCCCATCGAGCAAACTTAAGTATGAGGAAACAACTGTTACCGGTCTTGCTACCAATCTTACTGATTCCAAGATGGATGTCACTGTGTTTGAGGCACCGAGCTGCTATCCCAAGACCACAGACATTAAGAATAAAGATGTTACAGATTCAGAAGATTTTCCATCTCTTGAGCTTGGGTTAAAAAGGCTTAGAGGAGTTCAAAAGACGGGGAAAGCAGTCCAAGATGAGCGGAATGTTTTGAGACGCTCAGATTCTTCAGCCTTTTCTAGGTACAATGCTGGCTCAAATTCTAACAAGACTCCAACTGGTAATGCTGGAAGTAACTCTCCACCTACTAATGGCTTAGAAGCTACAAATCAAGAGAACATGCAAGATGTTCGATCTCGTTCCAGTGGTAACCCTCCCAATCAATGCTCAAATGGAGACAGCAATAATATCGACATGGGGTCCACTACCAATAATGCATTTTCCAAGTCCGTAGTTACTAATAACAAGTCAGCAATGGGATCAACAGTCAACTGTTTGTACCCATCGGCAGCTTTCCACCCTGTTAAGAATGACAGTCTATCTGTTCCACAGCAAGCTGATAATGTTAATAATGTCACAACTGCAACAATGCAAGCTCAGTCTAATTCTGTGCACAGGGAATCTCAAATGCAGCAACTTTGTTACACGTATGATCCTACTCATCAGCTTGTCCACAATATGCAACGATTATCATCTGAGCATAATGATTTTTCATTAAAGAAAATATCTGCAGCTGCCACACATTGTGGGTCAAACAATGTTTTAAATGGTACTGTAGAAGGTAATGCAGCGAATTATAGTGTGAATGGTAGTGCTTCGGGCAGTAACCATGGAAGCAATGGCCAAAATGGTAGTAGCACTGCAGTAAATGCTGGAGGGCCGAATATGGAAAGTGACAATGGAGTTGGTCGAAGTGGGGATGCGAGTGGGAGTGGGAGTGGGAGTGGGAGTGGGAGTGGGAGTGGGAGTGGAAGCGGAAGCGGAAGTGGAAGTGGAAACAAAATGGACCAAAACAAAGTTTCACAAAGGGAAGCTGCCTTGACAAAGTTTCGCCAGAAAAGAAAGGAAAGATGCTTCCGTAAAAAGGTCCGATACCAAAGCAGAAAGAGATTAGCCGAACAGAGACCCCGTGTCAGGGGACAGTTTGTGAGACAAAACACGAGCGAAAACACAAGCAATGCAGGAGATGGCTAA 2394 43.53 MSAHAGRLRELRETSHHAHDGNGSVNNGVSGREQSPIEENELKVNGLTRNTEDGRKSTVHAQDILQIQQQQQPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDDEEEDNESIGFNIADGSDDGSGTQSSWTKQAIEVESPRPVSASAWDHKRERPDSTCAQVVHSNADAFANNAAIILTAGCQVQKKQLETATLAKVELGMHRNLDLQLELSTEHPTKLVNRKQNIRLEIGSSGFNEQFNKGHLDLNSESPSSKLKYEETTVTGLATNLTDSKMDVTVFEAPSCYPKTTDIKNKDVTDSEDFPSLELGLKRLRGVQKTGKAVQDERNVLRRSDSSAFSRYNAGSNSNKTPTGNAGSNSPPTNGLEATNQENMQDVRSRSSGNPPNQCSNGDSNNIDMGSTTNNAFSKSVVTNNKSAMGSTVNCLYPSAAFHPVKNDSLSVPQQADNVNNVTTATMQAQSNSVHRESQMQQLCYTYDPTHQLVHNMQRLSSEHNDFSLKKISAAATHCGSNNVLNGTVEGNAANYSVNGSASGSNHGSNGQNGSSTAVNAGGPNMESDNGVGRSGDASGSGSGSGSGSGSGSGSGSGSGSGNKMDQNKVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQNTSENTSNAGDG* 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15638507 15645719 - Chy8G154110.1 Chy08g00806 232592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00806 797 MobiDBLite consensus disorder prediction 1 52 - -
Chy08g00806 797 MobiDBLite consensus disorder prediction 753 768 - -
Chy08g00806 797 MobiDBLite consensus disorder prediction 475 542 - -
Chy08g00806 797 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 773 IPR045279 GO:0009736
Chy08g00806 797 MobiDBLite consensus disorder prediction 780 797 - -
Chy08g00806 797 SUPERFAMILY CheY-like 87 213 IPR011006 -
Chy08g00806 797 MobiDBLite consensus disorder prediction 670 694 - -
Chy08g00806 797 ProSiteProfiles CCT domain profile. 743 785 IPR010402 GO:0005515
Chy08g00806 797 MobiDBLite consensus disorder prediction 702 745 - -
Chy08g00806 797 MobiDBLite consensus disorder prediction 458 542 - -
Chy08g00806 797 SMART REC_2 89 204 IPR001789 GO:0000160
Chy08g00806 797 MobiDBLite consensus disorder prediction 670 797 - -
Chy08g00806 797 CDD psREC_PRR 91 194 - -
Chy08g00806 797 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160
Chy08g00806 797 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160
Chy08g00806 797 MobiDBLite consensus disorder prediction 459 474 - -
Chy08g00806 797 MobiDBLite consensus disorder prediction 20 34 - -
Chy08g00806 797 MobiDBLite consensus disorder prediction 213 238 - -
Chy08g00806 797 MobiDBLite consensus disorder prediction 1 19 - -
Chy08g00806 797 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 26 773 - -
Chy08g00806 797 Pfam CCT motif 743 785 IPR010402 GO:0005515
Chy08g00806 797 Gene3D - 88 368 - -
Chy08g00806 797 MobiDBLite consensus disorder prediction 213 294 - -
Chy08g00806 797 MobiDBLite consensus disorder prediction 262 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00806 Chy-Chr8:15638507 Chy09g01472 Chy-Chr9:16142628 2.17E-18 dispersed
Chy08g00806 Chy-Chr8:15638507 Chy02g02099 Chy-Chr2:25279827 5.81E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18420 PF00072 Response_reg 1.60E-20 CL0304 Chy TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00806 K12129 - csv:101210765 1410.97