Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00837 ATGGAGATTATCAATGACCACAATAAGGTTATTCTGATCAATGGCGAAGCTGAGAGGAGGAAGAACAGTGAGAGAAGGAAAGAGGTGGGAATAATGTCTTGTAATTCTGATGAAGATTATGACCATGATCGCGATCATGTGGTGACGGGAATGATACTAGATCCAACTTTGCCAATATTGAACAAATGGAACAGGGTTTTTCTAGTGGCTTCTCTAGTCTCACTATTTGTTGACCCCCTCTTCTTCTTCCTACCGGTGGTGAACGCGGAGGACGGGTGCATCCAAATGAGTGCACAATTGGGTGTGGCGTTGACAGTGGTCCGATCCATGGCGGATGTGTTCTACATAGCGCACATACTCATTAGGTTTAGGACAGCTTACGTAGCTCCCTCCTCCAGAATCTTCGGGAGAGGAGACCTCGTGATTCACCCTTCTAAGATCGCAGCAAACTATCTTGGTTTCGAGTTTTGGCTTCATTTTGCTGCTGCATTGCCTCTTCCACAGGCATTCATATGGATTGCAATTCCAAAAATGAGGGGATGGAGTTGCATAGTTCGGTTGTGCATTCTGTTCCAGTACGTGTTGAGGTTGTATCTCATCTTCCCTTTATCTGATCAAATCATTAAGGCCACTGGAGTTCTGATGAAAACAGCTTGGGTTGGAGCTGTTTATAACCTAATGCTCTTTATGCTAGCAAGCCATGTATTGGGGTCGTGTTGGTACCTTTTATCCATAGGAAGACAAATGGAATGCTGGAAAAAAGTGTGCAATTTGGGGCATTACTTGGATTGTGAATATGAGCATTTTTATTGTAAAGCTGCACAAAGAGATCATCCTGCTTGGCGGTTTCATCTTAAAGCAACCAATATCTCAGATTTATGTAATCCAACTGCTACCAATTTCTTCCACTTTGGGATTTTTTCTGATTCTTTTGCTTCAACCTCTTCCCCCTTCATCAATAGGTCGTTGGTGAAGCCACTTCAACTTGATTTCTATGTTGAACATAGATGA 1011 42.93 MEIINDHNKVILINGEAERRKNSERRKEVGIMSCNSDEDYDHDRDHVVTGMILDPTLPILNKWNRVFLVASLVSLFVDPLFFFLPVVNAEDGCIQMSAQLGVALTVVRSMADVFYIAHILIRFRTAYVAPSSRIFGRGDLVIHPSKIAANYLGFEFWLHFAAALPLPQAFIWIAIPKMRGWSCIVRLCILFQYVLRLYLIFPLSDQIIKATGVLMKTAWVGAVYNLMLFMLASHVLGSCWYLLSIGRQMECWKKVCNLGHYLDCEYEHFYCKAAQRDHPAWRFHLKATNISDLCNPTATNFFHFGIFSDSFASTSSPFINRSLVKPLQLDFYVEHR* 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15861438 15864809 + Chy8G154420.1 Chy08g00837 232623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00837 336 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 20 321 - -
Chy08g00837 336 SUPERFAMILY Voltage-gated potassium channels 62 247 - -
Chy08g00837 336 Pfam Ion transport protein 63 278 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Chy08g00837 336 PANTHER PROTEIN CNGC15A 20 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00837 Chy-Chr8:15861438 Chy09g01430 Chy-Chr9:15884045 1.27E-64 dispersed
Chy11g00817 Chy-Chr11:11708053 Chy08g00837 Chy-Chr8:15861438 3.16E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00837 K05391 - csv:101221856 625.165