Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00847 ATGGCACCTGCCCAGTTGGAACAATTTGCTCACCAAAATGGCTCGATGGAGAGCTTTTGCACAAGCCATGTTGTCGATCCACTCAATTGGGGTGTGGCAGCTGAGGCTCTCAAGGGAAGCCATCTTGATGAGGTGAAGCGGATGGTGGATGAGTATAGAAGGCCTGTTGTGAAGCTTGGGGGTGAGACTCTCACCATTTCTCAGGTGGCTGCTATTGCCACTCGTGATAATAATGTAGTTGTGAAATTAGCTGAGTCTGCCAGAGCGGGTGTTAAAGCTAGTAGTGATTGGGTGATGGAGAGTATGAATAAAGGAACTGATAGTTATGGTGTAACTACTGGGTTTGGTGCTACATCTCATAGAAGGACAAAACAAGGTGGAGCTCTTCAGAAGGAGTTGATTCGATTTTTAAATGCTGGAATTTTTGGAAATGGAGCTGAGTCGAATCATATTTTGCCTCATTCAGCTACGAGGGCAGCCATGTTAGTGAGGATCAATACTTTGCTTCAAGGCTACTCGGGCATTCGATTTGAGATTTTGGAAGCTATTACTAATCTTCTCAATGAAAACGTTACTCCATGTTTGCCACTACGAGGAACAATTACGGCATCGGGGGATCTTGTCCCTTTATCGTATATTGCTGGGCTACTTACGGGTCGTCCTAATTCCAAGGCCATTGGGCCTAATGGGGAAACTCTTGACGCTAAGGCTGCCTTTCAACAAGCTGGTATTCCTTCTAGCTTTTTCGAGTTGCAGCCTAAAGAAGGTCTTGCTCTTGTCAATGGCACTGCTGTAGGTTCTGGGTTAGCTTCTATTGTCCTATTTGAGGCAAATATTCTAGCTGTTCTATCAGAAATTCTTTCTGCTATCTTTGCTGAGGTCATGCAAGGAAAGCCTGAATTTACTGATCATTTGACTCACAAGTTGAAGCATCACCCTGGTCAGATTGAAGCCGCCGCAATCATGGAACACATTTTGGATGGAAGTTCTTACATGAAAGCAGCCAAGAAACTACATGAAATTGATCCTCTCCAAAAGCCTAAACAAGATCGTTATGCTCTTAGAACTTCACCACAATGGCTTGGGCCATTGATTGAAGTGATTCGATTTTCTACCAAATCTATTGAGCGAGAGATTAACTCAGTCAATGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCATTACACGGAGGCAACTTCCAAGGAACACCGATTGGAGTTTCCATGGATAACACACGTTTGGCCATTGCTTCAATTGGAAAGCTCATGTTTGCCCAATTCTCAGAACTTGTCAATGACTTCTACAACAATGGTTTACCTTCTAATCTTTCTGCTAGTAGAAATCCTAGCTTGGATTATGGGTTTAAAGGAGCTGAAATTGCAATGGCTTCATACTGCTCTGAGCTTCAATATCTTGCAAATCCAGTGACAAGTCATGTTCAAAGTGCTGAGCAACATAACCAAGATGTTAATTCTCTTGGTTTAATCTCTTCAAGAAAAACTGCAGAAGCCATCGACATCTTGAAACTCATGTCATCCACATTTTTAGTTGCACTCTGCCAAGCAATTGACTTGAGGCATCTAGAGGAAAATTTGAAGAGCACGGTTAAAAGTGTAGTAAGTCAAGTAGTGAAAAAGTTATTAACAACATCCTCCAATGGCACACTACACCCATCAAGATTTTGCGAGAAAGATCTACTTAAAGTCGTTGACAGAGAATACACATTCGCATACATTGATGATCCATGCAATGCTACTTATCCATTGATGCAAAAGTTGAGACAAGTTCTAGTTGACCATGCCCTCACCAATGGTGAAAATGAAAAAAACATGAACACTTCCATCTTCCAGAAGATTACTGCTTTTGAAGAAGAACTAAAGGTAGCTTTACCGAAGGAAGTTGAAAATACAAGGTTGGCATATGAGAATGGAAATTCTAAAGTTGCAAATCAAATAAAGGATTGTCGATCTTATCCATTATATAAGTTTGTGAGAGAAGACTTGGGAACAAAACTTCTAACCGGAGAAAGAGTGATATCTCCAGGAGAAGAATGCGAGAAGGTATTCACAGCTTTATGTCAAGGAAAGATGATCGACTCTATTTTGGAGTGCTTAAAAGAGTGGAACGGGGCTCCCATTCCTATATGTTAG 2154 41.46 MAPAQLEQFAHQNGSMESFCTSHVVDPLNWGVAAEALKGSHLDEVKRMVDEYRRPVVKLGGETLTISQVAAIATRDNNVVVKLAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGAESNHILPHSATRAAMLVRINTLLQGYSGIRFEILEAITNLLNENVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGETLDAKAAFQQAGIPSSFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKSVVSQVVKKLLTTSSNGTLHPSRFCEKDLLKVVDREYTFAYIDDPCNATYPLMQKLRQVLVDHALTNGENEKNMNTSIFQKITAFEEELKVALPKEVENTRLAYENGNSKVANQIKDCRSYPLYKFVREDLGTKLLTGERVISPGEECEKVFTALCQGKMIDSILECLKEWNGAPIPIC* 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15967515 15969668 - Chy8G154520.1 Chy08g00847 232633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00847 717 CDD PAL-HAL 62 527 IPR001106 -
Chy08g00847 717 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 26 707 IPR005922 GO:0005737|GO:0006559|GO:0016841
Chy08g00847 717 Gene3D Fumarase/aspartase (Central domain) 264 712 - -
Chy08g00847 717 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 22 717 - -
Chy08g00847 717 Gene3D - 530 651 IPR023144 -
Chy08g00847 717 Gene3D - 17 263 IPR024083 -
Chy08g00847 717 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 199 215 IPR022313 GO:0016841
Chy08g00847 717 Pfam Aromatic amino acid lyase 64 540 IPR001106 -
Chy08g00847 717 SUPERFAMILY L-aspartase-like 26 717 IPR008948 GO:0003824
Chy08g00847 717 PANTHER HISTIDINE AMMONIA-LYASE 22 717 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00847 Chy-Chr8:15967515 Chy08g00849 Chy-Chr8:15975795 0 dispersed
Chy08g00846 Chy-Chr8:15963416 Chy08g00847 Chy-Chr8:15967515 0 tandem
Chy08g00847 Chy-Chr8:15967515 Chy08g00848 Chy-Chr8:15971588 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00847 K10775 - csv:101222092 1380.16