Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00848 ATGGCACCAATTGAGACCATATGCAAGAGCTTCACTCATGATCCTCTCCATTGGGGTGTGGCTGCGGAGTCGCTCAAGGGAAGCCATCTAGATGAGGTCAAACGCATGGTAGAGGAGTACCGAAGGCCTCTTGTAAAGCTTGGTGGTGAAACCCTCACCATTTCTCAAGTAGCTGCTATTGCTACTCGGGATTTTGATGTTACTGTTGAGCTTTCTGAGTCTGCTAGAGCAGGTGTGAAAGCTAGTAGTGATTGGGTTATGGAGAGTATGACAAAAGGCACTGATAGTTACGGAGTTACTACTGGTTTTGGTGCTACCTCTCATAGGAGGACAAAAAATGGTGGGGCTCTTCAGAAGGAGCTTATTCGATTCTTGAATGCTGGTATCTTTGGAAATGGTGCTGAGTCGTGTCATACTTTGTCTCGTTCGGCTACCAGAGCAGCCATGTTGGTGAGAATCAATACTCTTCTTCAAGGTTACTCAGGTATTAGATTTGAGATTTTGGAAGCCATCACCAAACTCTTGAACCATAACGTCACTCCATGTTTGCCTCTTCGTGGCACAATTACTGCTTCTGGTGATCTTGTTCCACTTTCTTACATTGCTGGATTGCTCACTGGTCGGCCAAATTCTAAAGCTATTGGTCCAAATGAAGAAAGTCTTGATGCAAACGAGGCTTTTCAACGAGCTGGTATTCCTTCTGGATTCTTTGAGTTGCAACCAAAGGAAGGTCTTGCTCTTGTCAATGGTACCGCTGTTGGTTCTGGATTGGCTTCTATCGTTCTCTTTGAAGCAAATATTTTAGCTGTCTTATCTGAGATTTTGTCAGCTATTTTTGCTGAAGTTATGCAAGGAAAACCTGAATTTACTGACCATTTAACCCATAAATTGAAGCATCATCCTGGACAGATTGAAGCAGCTGCAATCATGGAACACATTTTAGATGGGAGTTCTTACATGAAAACGGCAAAGAAGTTGCATGAAATGGATCCTCTCCAAAAGCCCAAACAAGATCGTTACGCTCTTAGAACTTCACCGCAATGGTTGGGTCCATTGATTGAAGTTATTAGGTTCTCAACAAAGTCTATAGAGCGTGAGATTAATTCAGTCAACGACAACCCTTTGATTGATGTTTCAAGGAACAAGGCTTTGCATGGAGGCAACTTCCAAGGAACTCCAATTGGAGTCTCCATGGACAACACTCGCTTGGCTATTGCTTCAATTGGAAAGCTCATGTTTGCTCAATTCTCAGAACTTGTCAATGACTTCTACAACAACGGTTTACCTTCTAATCTTTCTGCAAGTAGAAACCCTAGCTTGGATTATGGGTTTAAAGGTGCTGAAATTGCTATGGCTTCATATTGCTCTGAGCTTCAATATCTTGCAAATCCAGTCACAAGTCATGTCCAAAGTGCTGAACAACACAACCAAGATGTCAACTCTCTTGGCTTGATTTCTTCAAGAAAAACAGCCGAAGCCATTGATATTTTGAAACTCATGTCTTCCACCTTTTTAGTTGCTCTTTGCCAGGCAATTGACTTGAGGCATTTGGAGGAAAATCTCAAGAGCACTGTTAAAACTACTGTAAGCCAAGTAGCAAAGAAAGTTTTAACCACAGCCTCTAATGGTGGACTTCACCCATCGAGATTTTGTGAGAAAGACTTATTAAAAGTTGTTGACAGAGAGTATACTTTTGCCTATATAGATGATCCATGCAACGTCATTTACCCACTAATGCAAAAGTTGAGGCAAGTTCTTGTTGAGCACGCACTTGCAAATGGTGATGATGAAAAGAACACAAGCACTTCAATCTTCCAAAAGATTGCTACTTTTGAAGAGGAACTTAAGGTAGTTTTACCAAAGGCAGTTGAAAACACAAGGCTATCATACGAGAGTGGAGAAACACCCATTAAGAACCAAATTGAAGAATGTAGATCATATCCATTATATCAATTTGTGAGAAAAGAGTTGGGAACAAATTTGCTAACCGGTGAAAAAGTGATATCTCCAGGAGAAGAATGTGAAAAGGTATTCACGGCTTTGTGTCAAGGAAAGATGATTGATTCTATCTTGGAATGTTTGAAGGGGTGGAACGGAGCTCCAATTCCCATATGTTAG 2118 41.36 MAPIETICKSFTHDPLHWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDFDVTVELSESARAGVKASSDWVMESMTKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGAESCHTLSRSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNEESLDANEAFQRAGIPSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKTTVSQVAKKVLTTASNGGLHPSRFCEKDLLKVVDREYTFAYIDDPCNVIYPLMQKLRQVLVEHALANGDDEKNTSTSIFQKIATFEEELKVVLPKAVENTRLSYESGETPIKNQIEECRSYPLYQFVRKELGTNLLTGEKVISPGEECEKVFTALCQGKMIDSILECLKGWNGAPIPIC* 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15971588 15973705 - Chy8G154530.1 Chy08g00848 232634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00848 705 CDD PAL-HAL 50 515 IPR001106 -
Chy08g00848 705 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 8 705 - -
Chy08g00848 705 Gene3D - 6 251 IPR024083 -
Chy08g00848 705 Gene3D - 518 639 IPR023144 -
Chy08g00848 705 Gene3D Fumarase/aspartase (Central domain) 252 700 - -
Chy08g00848 705 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 14 695 IPR005922 GO:0005737|GO:0006559|GO:0016841
Chy08g00848 705 Pfam Aromatic amino acid lyase 52 525 IPR001106 -
Chy08g00848 705 SUPERFAMILY L-aspartase-like 14 705 IPR008948 GO:0003824
Chy08g00848 705 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 187 203 IPR022313 GO:0016841
Chy08g00848 705 PANTHER HISTIDINE AMMONIA-LYASE 8 705 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00845 Chy-Chr8:15959396 Chy08g00848 Chy-Chr8:15971588 0 dispersed
Chy08g00846 Chy-Chr8:15963416 Chy08g00848 Chy-Chr8:15971588 0 dispersed
Chy08g00848 Chy-Chr8:15971588 Chy11g00821 Chy-Chr11:11759326 0 dispersed
Chy08g00847 Chy-Chr8:15967515 Chy08g00848 Chy-Chr8:15971588 0 tandem
Chy08g00848 Chy-Chr8:15971588 Chy08g00849 Chy-Chr8:15975795 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00848 K10775 - csv:101218856 1364.75