Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00875 ATGGACAACCTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAACTCATACCATTTCTACTTTCACTTCTCTAGTGAGTATATGGGGCTTTCTCGGTCGAGTATTTTCGGGTTATGCTTCTGAATTCTTATGGACGAAGTATAACTTCTCTCGCCCTTTGTTCCTCACTTTTGTCCTTCTTCTCTCTTGCTTTGGCCATCTTCTAATTGCCTCCGGAGTCCCAACCTCCATTTATTTTGCTTCTGTGATCATTGGATTTTGCTTTGGAGCACAATGGCCACTGATTTTCGCCATTGTTTCTGAATTATTTGGCTTGAAATGCTATGCAACTTTATATAGCATTAGTGGAATTTCTAGCCCAGTTGGTTCATACATTTTCAATGTGAAAGTAGCTGGCTATTTATACAACCAAGAGGCTAGAAAGCAAATGGAATTCGCTCTTAGAAATGTAGCTGCTGGTAGAGACTTAGCCTGCAAGGGCGTCCATTGTTACAGATTAGCTTTTCTCATTATCTCTGCTGCAACCATGTTCGGTTGTTTTGTTTCATTCATTTTGGTGCTCCGAACTTGA 570 41.58 MDNLGQIGSSLGYSTHTISTFTSLVSIWGFLGRVFSGYASEFLWTKYNFSRPLFLTFVLLLSCFGHLLIASGVPTSIYFASVIIGFCFGAQWPLIFAIVSELFGLKCYATLYSISGISSPVGSYIFNVKVAGYLYNQEARKQMEFALRNVAAGRDLACKGVHCYRLAFLIISAATMFGCFVSFILVLRT* 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16171905 16172474 - Chy8G154800.1 Chy08g00875 232661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00875 189 Gene3D MFS general substrate transporter like domains 4 189 IPR036259 -
Chy08g00875 189 PANTHER MFS TRANSPORTER 1 189 - -
Chy08g00875 189 SUPERFAMILY MFS general substrate transporter 8 188 IPR036259 -
Chy08g00875 189 Pfam Major Facilitator Superfamily 7 185 IPR011701 GO:0022857|GO:0055085
Chy08g00875 189 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00875 Chy-Chr8:16171905 Chy10g01286 Chy-Chr10:17384287 1.22E-73 dispersed
Chy03g00916 Chy-Chr3:12652224 Chy08g00875 Chy-Chr8:16171905 4.52E-68 wgd
Chy04g02032 Chy-Chr4:25945943 Chy08g00875 Chy-Chr8:16171905 3.27E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00875 - - csv:101203981 360.533